DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0014160
GeneNr1h2
SynonymsLXRB
LXRbeta
RIP15
Unr2
Desc.nuclear receptor subfamily 1, group H, member 2
LocusNM_009473 chr7:51805003-51809293(-)
DB links


Entrez 22260
MGI 1352463
Ensembl ENSMUSG00000060601
Vega OTTMUSG00000023074
Featureprotein-coding
GO(BP)
  •   28 Terms
      negative regulation of transcription from RNA polymerase II promoter (GO:0000122)
      transcription, DNA-dependent (GO:0006351)
      regulation of transcription, DNA-dependent (GO:0006355)
      regulation of transcription from RNA polymerase II promoter (GO:0006357)
      positive regulation of gene expression (GO:0010628)
      negative regulation of gene expression (GO:0010629)
      positive regulation of triglyceride biosynthetic process (GO:0010867)
      positive regulation of cholesterol efflux (GO:0010875)
      positive regulation of lipid storage (GO:0010884)
      negative regulation of cholesterol storage (GO:0010887)
      intracellular receptor mediated signaling pathway (GO:0030522)
      positive regulation of cellular protein metabolic process (GO:0032270)
      negative regulation of lipid transport (GO:0032369)
      positive regulation of cholesterol transport (GO:0032376)
      cholesterol homeostasis (GO:0042632)
      steroid hormone mediated signaling pathway (GO:0043401)
      cellular lipid metabolic process (GO:0044255)
      positive regulation of fatty acid biosynthetic process (GO:0045723)
      negative regulation of proteolysis (GO:0045861)
      negative regulation of transcription, DNA-dependent (GO:0045892)
      positive regulation of transcription from RNA polymerase II promoter (GO:0045944)
      retinoic acid receptor signaling pathway (GO:0048384)
      negative regulation of pinocytosis (GO:0048550)
      positive regulation of lipoprotein lipase activity (GO:0051006)
      lipid homeostasis (GO:0055088)
      positive regulation of high-density lipoprotein particle assembly (GO:0090108)
      positive regulation of pancreatic juice secretion (GO:0090187)
      positive regulation of secretion of lysosomal enzymes (GO:0090340)
GO(MF)
  •   10 Terms
      sequence-specific transcription regulatory region DNA binding RNA polymerase II transcription factor recruiting transcription factor activity (GO:0001133)
      DNA binding (GO:0003677)
      sequence-specific DNA binding transcription factor activity (GO:0003700)
      steroid hormone receptor activity (GO:0003707)
      ligand-activated sequence-specific DNA binding RNA polymerase II transcription factor activity (GO:0004879)
      protein binding (GO:0005515)
      zinc ion binding (GO:0008270)
      sequence-specific DNA binding (GO:0043565)
      metal ion binding (GO:0046872)
      retinoid X receptor binding (GO:0046965)
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2014617
(v2.0)
Nr1h2NM_001285517,NM_001285518,NM_001285519,NM_00947322260
32.343413.46539.2169319.599431.751440.90549.0209917.460936.942653.413
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0014160
(v1.0)
Nr1h222260
MGA0.99043
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2014617
(v2.0)
Nr1h222260
764/5080.0758322/508-0.77268/5080.6869246/5080.283831/508-1.9427379/508-1.0191
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2014617
(v2.0)
Nr1h222260
314/2080.081128/208-0.811457/2081.6768214/2081.36174/208-3.349386/208-1.8553
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2014617
(v2.0)
Nr1h222260
135.431721463.29
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2014617
(v2.0)
Nr1h222260
42.000210739.25
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0014160
(v1.0)
Nr1h2NM_00947322260
13.90966.3766314.697622.07886.39727
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0014160
(v1.0)
Nr1h2NM_00947322260
31.511912.988331.694750.189721.986
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0014160
(v1.0)
Nr1h2NM_00947322260
14.543812.05896.95704
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0014160
(v1.0)
Nr1h2NM_00947322260
14.19626.312613.1665
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0014160
(v1.0)
Nr1h2NM_00947322260
24.229541.4065
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0014160
(v1.0)
Nr1h2NM_00947322260
14.552211.893814.4406
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0014160
(v1.0)
Nr1h2NM_00947322260
13.607721.317925.3777
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0014160
(v1.0)
Nr1h2NM_00947322260
139.945181.822
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0014160
(v1.0)
Nr1h2NM_00947322260
5.28812.1348
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0014160
(v1.0)
Nr1h2NM_00947322260
48.110133.2923
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0014160
(v1.0)
7993H3057H11-3Mm.968Nr1h222260
U041431NAP030699-1Nr1h2;TC799470,TC799469Q60644U,F3.24033.13053.16183.06963.74883.33533.5625
MOE430 N/A
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0014160
(v1.0)
A_51_P400203Nr1h2NM_00947322260
11P0.8070.282P
Proteome N/A