DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0014180
GeneNr5a2
SynonymsD1Ertd308e
Ftf
LRH-1
UF2-H3B
Desc.nuclear receptor subfamily 5, group A, member 2
LocusNM_001159769 chr1:138740161-138850207(-)
NM_030676 chr1:138740161-138857025(-)
DB links


Entrez 26424
MGI 1346834
Ensembl ENSMUSG00000026398
Featureprotein-coding
GO(BP)
  •   10 Terms
      transcription, DNA-dependent (GO:0006351)
      regulation of transcription, DNA-dependent (GO:0006355)
      bile acid metabolic process (GO:0008206)
      intracellular receptor mediated signaling pathway (GO:0030522)
      regulation of cell proliferation (GO:0042127)
      cholesterol homeostasis (GO:0042632)
      steroid hormone mediated signaling pathway (GO:0043401)
      positive regulation of viral genome replication (GO:0045070)
      positive regulation of transcription, DNA-dependent (GO:0045893)
      positive regulation of transcription from RNA polymerase II promoter (GO:0045944)
GO(MF)
GO(CC)
KEGG
  •   1 Terms
      Maturity onset diabetes of the young (mmu04950)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2014637
(v2.0)
Nr5a2NM_001159769,NM_03067626424
017.072523.7405117.853211.0610.7720.11178322.9648166.7534.74137
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0014180
(v1.0)
Nr5a226424
MGA0.98906
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2014637
(v2.0)
Nr5a226424
803/4890.2024516/489-0.038656/4890.4649433/4891.1517690/4892.54443196/4892.1067
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2014637
(v2.0)
Nr5a226424
332/2100.1473208/210-0.129438/2101.0912232/2101.464327/2102.67281377/2102.1084
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2014637
(v2.0)
Nr5a226424
43.72517425.13
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2014637
(v2.0)
Nr5a226424
10.19247613.41
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0014180
(v1.0)
Nr5a2NM_001159769,NM_03067626424
17.745716.37887.6143146.1960.073238
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0014180
(v1.0)
Nr5a2NM_001159769,NM_03067626424
20.11116.872295.7731171.3180.0724241
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0014180
(v1.0)
Nr5a2NM_001159769,NM_03067626424
18.5548017.8687
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0014180
(v1.0)
Nr5a2NM_001159769,NM_03067626424
18.111316.213517.0097
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0014180
(v1.0)
Nr5a2NM_001159769,NM_03067626424
21.875167.2581
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0014180
(v1.0)
Nr5a2NM_001159769,NM_03067626424
18.5655018.6556
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0014180
(v1.0)
Nr5a2NM_001159769,NM_03067626424
81.1172141.158115.544
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0014180
(v1.0)
Nr5a2NM_001159769,NM_03067626424
209.074192.068
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0014180
(v1.0)
Nr5a2NM_001159769,NM_03067626424
18.754849.3348
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0014180
(v1.0)
Nr5a2NM_001159769,NM_03067626424
2.806181.62103
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0014180
(v1.0)
7397H3047D07-3Nr5a226424
U021824NAP097920-001Nr5a2;TC910900P45448U,F,22.79222.99313.19523.59043.28853.43473.0768
0014180
(v1.0)
9889H3087G01-3Nr5a226424
U021824NAP097920-001Nr5a2;TC910900,TC910899P45448U,F,22.48762.39233.16043.67733.333.382.9444
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0014180
(v1.0)
1420410_atMm.16794Nr5a2NM_030676.3,NM_001159769.226424
147.7145.225323.4751081.5318.55
0014180
(v1.0)
1449706_s_atMm.16794Nr5a2NM_030676.3,NM_001159769.226424
70.7750212.4720.225162.9
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0014180
(v1.0)
A_51_P514449Nr5a2NM_03067626424
11P0.5410.103P
Proteome N/A