DBTMEE

DBTMEE
Database of Transcriptome in Mouse Early Embryos

DBTMEE:0014191

Gene

Nrf1

Synonyms

D6Ertd415e

Description

nuclear respiratory factor 1

Locus

NM_001164228 UCSC: chr6:29997988-30095197(+) OLP: chr6:29997988-30095197(+)
NM_001164226 UCSC: chr6:29997988-30103458(+) OLP: chr6:29997988-30103458(+)
NM_001164230 UCSC: chr6:29997988-30080115(+) OLP: chr6:29997988-30080115(+)
NM_010938 UCSC: chr6:29997988-30103458(+) OLP: chr6:29997988-30103458(+)
NM_001164227 UCSC: chr6:29997988-30095197(+) OLP: chr6:29997988-30095197(+)
NM_001164229 UCSC: chr6:30026321-30080115(+) OLP: chr6:30026321-30080115(+)

DB links

Entrez 18181
MGI 1332235
Ensembl ENSMUSG00000058440
Vega OTTMUSG00000014351

Feature

protein-coding

GO_BP

4 Terms

GO_MF

2 Terms

GO_CC

3 Terms

KEGG

1 Terms

see DBTMEE:2014650 (v2.0)

SPR_Histone_Erkek_5KaroundTSS

N/A

SPR_Histone_Erkek_2KaroundTSS

N/A

SPR_Methy_Kobayashi_5KaroundTSS

N/A

SPR_Methy_Kobayashi_2KaroundTSS

N/A

SOLiD_OocyteTo4C_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	SPR_FPKM	Oo_FPKM	1C_FPKM	2C_FPKM	4C_FPKM	MEF_FPKM
0014191 (v1.0)	Nrf1	NM_001164226,NM_001164227,NM_001164228,NM_001164229,NM_001164230,NM_010938	18181	74.2771	53.8183	72.2561	51.4311	8.36724

SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_FPKM	SPR_FPKM	1C_FPKM
0014191 (v1.0)	Nrf1	NM_001164226,NM_001164227,NM_001164228,NM_001164229,NM_001164230,NM_010938	18181	77.6635	1.6756	58.717

SOLiD_Partheno1C_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_FPKM	1C_FPKM	p1C_FPKM
0014191 (v1.0)	Nrf1	NM_001164226,NM_001164227,NM_001164228,NM_001164229,NM_001164230,NM_010938	18181	75.8072	53.2779	80.7713

SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_FPKM	SPR_FPKM	p1C_FPKM
0014191 (v1.0)	Nrf1	NM_001164226,NM_001164227,NM_001164228,NM_001164229,NM_001164230,NM_010938	18181	77.7086	1.65265	88.5873

SOLiD_Partheno4C_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	2C_FPKM	4C_FPKM	p4C_FPKM
0014191 (v1.0)	Nrf1	NM_001164226,NM_001164227,NM_001164228,NM_001164229,NM_001164230,NM_010938	18181	66.8979	49.6588	47.0377

Illumina_Oo_2C_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_FPKM	2C_FPKM
0014191 (v1.0)	Nrf1	NM_001164226,NM_001164227,NM_001164228,NM_001164229,NM_001164230,NM_010938	18181	16.3015	12.9282

SOLiD_SC_Oo_REPLICA_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_1_1	Oo_2_1
0014191 (v1.0)	Nrf1	NM_001164226,NM_001164227,NM_001164228,NM_001164229,NM_001164230,NM_010938	18181	6.57723	2.7422

DBTMEE	Array_Feature_Number	Oligo_Parent_Clone	Unigene	Gene	Entrez	U_Cluster	NAP_Cluster	Gene_U/NAP	TIGR	SwissProt	EST	Oo	1C	2C	4C	8C	Morula	Blastocyst
0014191 (v1.0)	1062	C0176A02-3	Mm.45045	Nrf1	18181				TC821203			2.0518	2.393	2.5598	2.9052	2.2107	2.2899	2.2717
0014191 (v1.0)	7911	H3056C03-3	Mm.45045	Nrf1	18181	U006624	NAP000680-001	Nrf1;	TC870409,TC870407,TC821203	Q9WU00	U,F,2	2.899	2.8539	2.9288	3.0163	2.7581	2.7726	2.7388

DBTMEE	Probe_ID	Unigene	Gene	RefSeq	Entrez	Oo	1C	2C	8C	Blastocyst
0014191 (v1.0)	1424787_a_at	Mm.259258	Nrf1	NM_001164226.1,NM_010938.4,NM_001164229.1,NM_001164230.1,NM_001164227.1,NM_001164228.1	18181	228.1	199.1	327.775	212.325	101.75
0014191 (v1.0)	1434627_at	Mm.259258	Nrf1	NM_001164226.1,NM_010938.4,NM_001164229.1,NM_001164230.1,NM_001164227.1,NM_001164228.1	18181	873	772.775	683.425	380.5	327.125
0014191 (v1.0)	1445914_at	Mm.259258	Nrf1	NM_001164226.1,NM_010938.4,NM_001164229.1,NM_001164230.1,NM_001164227.1,NM_001164228.1	18181	263.625	281.65	331.65	458.675	327.7

N/A

N/A