DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0014191
GeneNrf1
SynonymsD6Ertd415e
Desc.nuclear respiratory factor 1
LocusNM_001164228 chr6:29997988-30095197(+)
NM_001164226 chr6:29997988-30103458(+)
NM_001164230 chr6:29997988-30080115(+)
NM_010938 chr6:29997988-30103458(+)
NM_001164227 chr6:29997988-30095197(+)
NM_001164229 chr6:30026321-30080115(+)
DB links


Entrez 18181
MGI 1332235
Ensembl ENSMUSG00000058440
Vega OTTMUSG00000014351
Featureprotein-coding
GO(BP)
GO(MF)
  •   2 Terms
GO(CC)
KEGG
  •   1 Terms
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2014650
(v2.0)
Nrf1NM_001164226,NM_001164227,NM_001164228,NM_001164229,NM_001164230,NM_01093818181
4.5816971.802477.708697.093674.52515.5215711.8382108.76767.97775.42035
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0014191
(v1.0)
Nrf118181
2-Cell Transient0.96863
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2014650
(v2.0)
Nrf118181
738/3540.5458502/3540.3868122/3542.0274331/3541.228552/354-0.6988394/354-0.4434
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2014650
(v2.0)
Nrf118181
404/1181.2557239/1180.8964107/1183.3321257/1182.42942/118-3.289983/118-1.093
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2014650
(v2.0)
Nrf118181
61.071213046.98
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2014650
(v2.0)
Nrf118181
17.14878320.66
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0014191
(v1.0)
Nrf1NM_001164226,NM_001164227,NM_001164228,NM_001164229,NM_001164230,NM_01093818181
74.277153.818372.256151.43118.36724
SOLiD_NMNR_Oo-4C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0014191
(v1.0)
Nrf1NM_001164226,NM_001164227,NM_001164228,NM_001164229,NM_001164230,NM_01093818181
77.66351.675658.717
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0014191
(v1.0)
Nrf1NM_001164226,NM_001164227,NM_001164228,NM_001164229,NM_001164230,NM_01093818181
75.807253.277980.7713
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0014191
(v1.0)
Nrf1FR223474,NM_001164226,NM_001164227,NM_001164228,NM_001164229,NM_001164230,NM_01093818181
64.224198.1085
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0014191
(v1.0)
Nrf1NM_001164226,NM_001164227,NM_001164228,NM_001164229,NM_001164230,NM_01093818181
77.70861.6526588.5873
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0014191
(v1.0)
Nrf1NM_001164226,NM_001164227,NM_001164228,NM_001164229,NM_001164230,NM_01093818181
66.897949.658847.0377
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0014191
(v1.0)
Nrf1FR223474,NM_001164226,NM_001164227,NM_001164228,NM_001164229,NM_001164230,NM_01093818181
62.482460.6847
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0014191
(v1.0)
Nrf1NM_001164226,NM_001164227,NM_001164228,NM_001164229,NM_001164230,NM_01093818181
16.301512.9282
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0014191
(v1.0)
Nrf1NM_001164226,NM_001164227,NM_001164228,NM_001164229,NM_001164230,NM_01093818181
6.577232.7422
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0014191
(v1.0)
1062C0176A02-3Mm.45045Nrf118181
TC8212032.05182.3932.55982.90522.21072.28992.2717
0014191
(v1.0)
7911H3056C03-3Mm.45045Nrf118181
U006624NAP000680-001Nrf1;TC870409,TC870407,TC821203Q9WU00U,F,22.8992.85392.92883.01632.75812.77262.7388
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0014191
(v1.0)
1424787_a_atMm.259258Nrf1NM_001164226.1,NM_010938.4,NM_001164229.1,NM_001164230.1,NM_001164227.1,NM_001164228.118181
228.1199.1327.775212.325101.75
0014191
(v1.0)
1434627_atMm.259258Nrf1NM_001164226.1,NM_010938.4,NM_001164229.1,NM_001164230.1,NM_001164227.1,NM_001164228.118181
873772.775683.425380.5327.125
0014191
(v1.0)
1445914_atMm.259258Nrf1NM_001164226.1,NM_010938.4,NM_001164229.1,NM_001164230.1,NM_001164227.1,NM_001164228.118181
263.625281.65331.65458.675327.7
Agilent44K N/A
Proteome N/A