DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0014215
GeneNsa2
SynonymsLNR42
Nsa2p
Yr29
Desc.NSA2 ribosome biogenesis homolog (S. cerevisiae)
LocusNM_021552 chr13:97899382-97907881(-)
DB links


Entrez 59050
MGI 1913883
Ensembl ENSMUSG00000060739
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2014676
(v2.0)
Nsa2NM_02155259050
59.640424.957625.3274117.869130.767129.57560.341723.0277103.448148.062
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0014215
(v1.0)
Nsa259050
Major ZGA0.99976
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2014676
(v2.0)
Nsa259050
508/2910.2901408/2910.3702115/2912.2152283/2911.28379/291-2.825761/291-2.823
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2014676
(v2.0)
Nsa259050
204/1020.4832145/1020.388112/1023.5867276/1022.73744/102-2.350424/102-2.6126
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2014676
(v2.0)
Nsa259050
92.934514663.65
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2014676
(v2.0)
Nsa259050
27.04617536.06
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0014215
(v1.0)
Nsa2NM_02155259050
25.938317.45787.76790.716842.538
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0014215
(v1.0)
Nsa2NM_02155259050
1.171090.6132782.748633.426671.64957
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0014215
(v1.0)
Nsa2NM_02155259050
27.120921.811219.046
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0014215
(v1.0)
Nsa2NM_02155259050
26.472717.281717.0457
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0014215
(v1.0)
Nsa2NM_02155259050
0.622920.488652
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0014215
(v1.0)
Nsa2NM_02155259050
27.136721.512518.6952
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0014215
(v1.0)
Nsa2NM_02155259050
81.258687.590771.5783
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0014215
(v1.0)
Nsa2NM_02155259050
3.389672.47045
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0014215
(v1.0)
Nsa2NM_02155259050
22.27355.9735
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0014215
(v1.0)
Nsa2NM_02155259050
3.7941111.0499
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0014215
(v1.0)
235C0006G04-5Mm.277965730427N09Rik59050
U042076NAP123766-15730427N09Rik;TC804471,TC804465Q9CYK0U,F,22.80782.91522.86362.71462.38712.56772.4384
0014215
(v1.0)
18624L0218B08-3Mm.277965730427N09Rik59050
U042076NAP104162-1TC804465Q9CYK0U,F,23.03013.24063.31543.62783.18563.36783.2323
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0014215
(v1.0)
1423131_atMm.422907Nsa259050
105160.975277.075229.175159.1
0014215
(v1.0)
1423132_a_atMm.422907Nsa259050
0261.475423579.2585.3
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0014215
(v1.0)
A_51_P2841665730427N09RikNM_02155259050
11P0.7930.26P
Proteome N/A