DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0014216
GeneNsd1
SynonymsKMT3B
Desc.nuclear receptor-binding SET-domain protein 1
LocusNM_008739 chr13:55311143-55419686(+)
DB links


Entrez 18193
MGI 1276545
Ensembl ENSMUSG00000021488
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
KEGG
  •   1 Terms
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2014677
(v2.0)
Nsd1NM_00873918193
10.749760.6488150.8942.173431.527816.350624.2286146.5235.928716.3824
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0014216
(v1.0)
Nsd118193
Minor ZGA0.96126
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2014677
(v2.0)
Nsd118193
980/4510.6057460/451-0.0875180/4512.2456521/4511.534255/451-0.9651501/451-0.4465
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2014677
(v2.0)
Nsd118193
521/1950.9016230/1950.121485/1952.3329177/1951.181224/195-0.9362254/195-0.2168
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2014677
(v2.0)
Nsd118193
51.823217629.45
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2014677
(v2.0)
Nsd118193
16.51849118.15
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0014216
(v1.0)
Nsd1NM_00873918193
63.0404104.54631.381321.830317.0235
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0014216
(v1.0)
Nsd1FR193286,NM_00873918193
1668.482822.09600.437416.307158.206
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0014216
(v1.0)
Nsd1NM_00873918193
65.91453.93126114.062
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0014216
(v1.0)
Nsd1NM_00873918193
64.3391103.496108.389
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0014216
(v1.0)
Nsd1FR193286,NM_00873918193
2130.221821.73
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0014216
(v1.0)
Nsd1NM_00873918193
65.95283.87741118.877
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0014216
(v1.0)
Nsd1NM_00873918193
29.054221.078124.8559
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0014216
(v1.0)
Nsd1FR193286,NM_00873918193
299.823306.53
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0014216
(v1.0)
Nsd1NM_00873918193
58.499723.5291
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0014216
(v1.0)
Nsd1NM_00873918193
2.962563.87302
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0014216
(v1.0)
3180C0613D07-3Mm.12964Nsd118193
U043337NAP032004-1Nsd1;TC819249O88491U,F,22.70442.72322.77682.68172.87132.79062.8358
0014216
(v1.0)
15339K0128H08-3Mm.133522U043337NAP033239-1Nsd1;TC819249O88491U,F,23.15773.32953.2373.07832.76352.9632.8668
0014216
(v1.0)
15456K0146E03-3Mm.12964Nsd118193
U043337NAP098332-001TC819249,TC819248,TC811582O88491U,F,23.85684.08654.41844.15893.73954.07683.8595
0014216
(v1.0)
22231L0950B04-3U043337NAP039862-1Nsd1;O88491U,F,22.71662.57332.46172.51352.85842.74472.739
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0014216
(v1.0)
1420881_atMm.168965Nsd1NM_008739.318193
069.87550.900
0014216
(v1.0)
1435088_atMm.168965Nsd1NM_008739.318193
1110.61156.951111.925479.175952.1
0014216
(v1.0)
1440972_atMm.168965Nsd1NM_008739.318193
00193.55301.775512.5
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0014216
(v1.0)
A_51_P128414Nsd1XM_62208818193
11P1.2150.43P
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0014216
(v1.0)
Nsd118193
010010