DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0014269
GeneNucb1
SynonymsCalnuc
MTEST82
Desc.nucleobindin 1
LocusNM_008749 chr7:52748044-52765778(-)
NM_001163662 chr7:52748044-52765778(-)
DB links


Entrez 18220
MGI 97388
Ensembl ENSMUSG00000030824
Vega OTTMUSG00000024466
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2014731
(v2.0)
Nucb1NM_001163662,NM_00874918220
162.02631.5467.347786.750545.8394937.393832.39969.066885.6468533.2975
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0014269
(v1.0)
Nucb118220
Maternal RNA0.99879
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2014731
(v2.0)
Nucb118220
674/4250.1521447/425-0.0433557/4253.95331443/4253.087365/425-0.6432414/425-0.6353
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2014731
(v2.0)
Nucb118220
251/1610.1271151/161-0.207382/1612.5404304/1612.230711/161-1.72575/161-1.6815
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2014731
(v2.0)
Nucb118220
68.839413750.25
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2014731
(v2.0)
Nucb118220
19.50257426.35
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0014269
(v1.0)
Nucb1NM_001163662,NM_00874918220
32.80545.107725.011884.0406522.7673
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0014269
(v1.0)
Nucb1NM_001163662,NM_00874918220
219.34834.520256.969557.5004151.532
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0014269
(v1.0)
Nucb1NM_001163662,NM_00874918220
34.30159.2555.57264
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0014269
(v1.0)
Nucb1NM_001163662,NM_00874918220
33.48125.056446.74007
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0014269
(v1.0)
Nucb1NM_001163662,NM_00874918220
35.283127.1955
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0014269
(v1.0)
Nucb1NM_001163662,NM_00874918220
34.32158.44357.39228
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0014269
(v1.0)
Nucb1NM_001163662,NM_00874918220
4.640223.901413.92685
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0014269
(v1.0)
Nucb1NM_001163662,NM_00874918220
27.886314.5607
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0014269
(v1.0)
Nucb1NM_001163662,NM_00874918220
7.974582.3477
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0014269
(v1.0)
Nucb1NM_001163662,NM_00874918220
0.3886380.311929
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0014269
(v1.0)
7603H3050F03-3Mm.2283Nucb18220
U028532NAP002666-001Nucb;TC891870,TC891866,TC891865Q02819U,F,23.16243.11593.10043.2012.96633.20493.2382
MOE430 N/A
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0014269
(v1.0)
A_51_P433733Nucb1NM_00874918220
11P0.7240.192P
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0014269
(v1.0)
Nucb118220
9157122110