DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0014272
GeneNudc
SynonymsNudC
Silg92
Desc.nuclear distribution gene C homolog (Aspergillus)
LocusNM_010948 chr4:133088457-133101942(-)
DB links


Entrez 18221
MGI 106014
Ensembl ENSMUSG00000028851
Vega OTTMUSG00000011151
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2014734
(v2.0)
NudcNM_01094818221
65.8001329.948269.6861.8658124.638299.21653.5108317.239111.753359.51
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0014272
(v1.0)
Nudc18221
Maternal RNA0.95623
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2014734
(v2.0)
Nudc18221
663/4360.0917438/436-0.1093118/4361.6881364/4361.066671/436-0.5542610/436-0.1146
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2014734
(v2.0)
Nudc18221
318/1710.3803217/1710.2263107/1712.8392292/1712.087116/171-1.3073150/171-0.7823
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2014734
(v2.0)
Nudc18221
62.343413745.51
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2014734
(v2.0)
Nudc18221
14.86838617.29
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0014272
(v1.0)
NudcNM_01094818221
342.936187.35246.003786.294838.0087
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0014272
(v1.0)
NudcNM_01094818221
1254.05512.044138.599203.412158.967
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0014272
(v1.0)
NudcNM_01094818221
358.57124.0638204.405
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0014272
(v1.0)
NudcNM_01094818221
350.001185.471235.617
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0014272
(v1.0)
NudcNM_01094818221
365.885600.851
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0014272
(v1.0)
NudcNM_01094818221
358.77923.7342258.417
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0014272
(v1.0)
NudcNM_01094818221
42.592283.321177.4215
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0014272
(v1.0)
NudcNM_01094818221
259.779324.319
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0014272
(v1.0)
NudcNM_01094818221
671.78882.1645
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0014272
(v1.0)
NudcNM_01094818221
63.84821.522
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0014272
(v1.0)
11746H3122D09-3Mm.69Nudc18221
U025620NAP096266-001Nudc;TC799163O35685U4.62544.89214.34194.83614.66764.77324.6361
0014272
(v1.0)
15583K0208E10-3Mm.69Nudc18221
U026602NAP042044-19130222L19Rik;TC899865Q9D273U3.16422.91352.93752.99713.34633.12753.2076
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0014272
(v1.0)
1419471_a_atMm.69NudcNM_010948.318221
740.9473.325257.575222.425233.575
0014272
(v1.0)
1419472_s_atMm.69NudcNM_010948.318221
2613.5251876.4870.85913.0751313.5
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0014272
(v1.0)
A_51_P238933NudcNM_01094818221
11P0.9160.542P
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0014272
(v1.0)
Nudc18221
172312314116