DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0014298
GeneNuf2
SynonymsCdca1
Nuf2R
Desc.NUF2, NDC80 kinetochore complex component, homolog (S. cerevisiae)
LocusNM_023284 chr1:171428065-171461595(-)
DB links


Entrez 66977
MGI 1914227
Ensembl ENSMUSG00000026683
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2014760
(v2.0)
Nuf2NM_02328466977
2.3095973.2482115.27116.20495.8087211.957416.818878.14656.8387616.5856
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0014298
(v1.0)
Nuf266977
Minor ZGA0.98826
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2014760
(v2.0)
Nuf266977
437/2750.1549315/2750.079489/2751.9273257/2751.226140/275-0.7096275/275-0.5967
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2014760
(v2.0)
Nuf266977
231/1150.4898149/1150.255487/1153.0703244/1152.391217/115-0.669191/115-0.9257
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2014760
(v2.0)
Nuf266977
42.32489246.01
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2014760
(v2.0)
Nuf266977
13.44026221.68
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0014298
(v1.0)
Nuf2NM_02328466977
76.099279.498312.05954.0381812.0309
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0014298
(v1.0)
Nuf2NM_02328466977
952.393720.432141.61192.1918107.054
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0014298
(v1.0)
Nuf2NM_02328466977
79.56870.8446486.7344
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0014298
(v1.0)
Nuf2NM_02328466977
77.666978.757.8043
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0014298
(v1.0)
Nuf2NM_02328466977
395.831368.794
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0014298
(v1.0)
Nuf2NM_02328466977
79.61490.83307263.3978
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0014298
(v1.0)
Nuf2NM_02328466977
11.16523.899024.78474
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0014298
(v1.0)
Nuf2NM_02328466977
47.006832.5158
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0014298
(v1.0)
Nuf2NM_02328466977
53.36537.11572
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0014298
(v1.0)
Nuf2NM_02328466977
80.286692.1225
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0014298
(v1.0)
14941J0915B05-3Mm.1513152410003C07Rik66977
U022024NAP098080-0012410003C07Rik;TC837266,TC837264,TC837263Q99P69U,F,23.84214.06083.54543.12353.08183.21063.2008
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0014298
(v1.0)
1430811_a_atMm.151315Nuf2NM_023284.366977
767.7751237.925389.1250150.275
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0014298
(v1.0)
A_51_P513682Cdca1NM_02328466977
11P1.0490.714P
Proteome N/A