DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0014309
GeneNup188
Synonyms
Desc.nucleoporin 188
LocusNM_198304 chr2:30141953-30199782(+)
DB links


Entrez 227699
MGI 2446190
Ensembl ENSMUSG00000052533
Vega OTTMUSG00000016767
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
KEGG
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2014772
(v2.0)
Nup188NM_198304227699
11.000228.884518.316615.594211.374325.878712.882822.643112.007521.4018
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0014309
(v1.0)
Nup188227699
Maternal RNA0.98159
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2014772
(v2.0)
Nup188227699
705/4860.0238430/486-0.2922183/4862.1642399/4861.042931/486-1.8793155/486-2.237
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2014772
(v2.0)
Nup188227699
357/2340.0962210/234-0.271173/2343.1007382/2342.026714/234-1.931175/234-2.2182
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2014772
(v2.0)
Nup188227699
65.250913349.06
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2014772
(v2.0)
Nup188227699
25.67089028.52
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0014309
(v1.0)
Nup188NM_198304227699
30.047612.691411.59587.849219.10654
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0014309
(v1.0)
Nup188NM_198304227699
963.487418.938418.228331.529320.985
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0014309
(v1.0)
Nup188NM_198304227699
31.41754.0228713.8466
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0014309
(v1.0)
Nup188NM_198304227699
30.666612.56416.8128
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0014309
(v1.0)
Nup188NM_198304227699
387.714393.479
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0014309
(v1.0)
Nup188NM_198304227699
31.43583.9677718.4398
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0014309
(v1.0)
Nup188NM_198304227699
10.73597.578738.32394
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0014309
(v1.0)
Nup188NM_198304227699
319.781213.245
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0014309
(v1.0)
Nup188NM_198304227699
4.761273.90863
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0014309
(v1.0)
Nup188NM_198304227699
5.993765.97774
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0014309
(v1.0)
3231C0622A07-3Mm.23992LOC227699227699
U001584NAP007819-001U89435;TC848444O890834.01584.30454.64754.47813.89954.22854.0078
MOE430 N/A
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0014309
(v1.0)
A_51_P312550Nup188NM_198304227699
11P0.7530.293P
0014309
(v1.0)
A_51_P316772Nup188AK052272227699
11P1.8160.11P
0014309
(v1.0)
A_51_P421041Nup188U89435227699
11P1.8370.109P
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0014309
(v1.0)
Nup188227699
120140