DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0014314
GeneNup35
Synonyms
Desc.nucleoporin 35
LocusNM_027091 chr2:80478969-80500228(+)
NM_001190179 chr2:80479421-80500228(+)
DB links


Entrez 69482
MGI 1916732
Ensembl ENSMUSG00000026999
Vega OTTMUSG00000018807
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
KEGG
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2014777
(v2.0)
Nup35NM_001190179,NM_02709169482
13.7616102.91185.402743.457157.60216.4608411.694275.819940.75468.16271
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0014314
(v1.0)
Nup3569482
Maternal RNA0.95127
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2014777
(v2.0)
Nup3569482
769/3280.7148630/3280.8235904/3285.01293559/3284.760496/3280.2819509/3280.0345
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2014777
(v2.0)
Nup3569482
384/1470.868302/1470.9179592/1475.49891984/1475.06237/1470.0657204/147-0.1257
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2014777
(v2.0)
Nup3569482
54.10289258.81
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2014777
(v2.0)
Nup3569482
19.01085435.21
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0014314
(v1.0)
Nup35NM_001190179,NM_02709169482
106.9158.87832.383139.96688.32587
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0014314
(v1.0)
Nup35NM_001190179,NM_02709169482
40.902722.545447.265246.73857.81243
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0014314
(v1.0)
Nup35NM_001190179,NM_02709169482
111.7845.0327664.2372
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0014314
(v1.0)
Nup35NM_001190179,NM_02709169482
109.11258.286856.1259
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0014314
(v1.0)
Nup35NM_001190179,NM_02709169482
4.288053.41999
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0014314
(v1.0)
Nup35NM_001190179,NM_02709169482
111.8494.9638361.557
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0014314
(v1.0)
Nup35NM_001190179,NM_02709169482
29.981738.589528.1384
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0014314
(v1.0)
Nup35NM_001190179,NM_02709169482
3.018542.36945
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0014314
(v1.0)
Nup35NM_001190179,NM_02709169482
6.0885428.3912
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0014314
(v1.0)
Nup35NM_001190179,NM_02709169482
93.5005113.145
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0014314
(v1.0)
7870H3055E06-3Mm.292002310006I24Rik69482
U029159NAP096452-001TC941653,TC941652Q9D7J2U,F,24.55544.57414.24.28373.9043.98523.737
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0014314
(v1.0)
1426447_atMm.29200Nup35NM_001190179.1,NM_027091.469482
2082.4253891.5251664.175636.725396.475
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0014314
(v1.0)
A_51_P259230Nup35NM_02709169482
11P1.0970.524P
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0014314
(v1.0)
Nup3569482
034045