DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0014319
GeneNup62
SynonymsD7Ertd649e
Nupc1
p62
Desc.nucleoporin 62
LocusNM_053074 chr7:52071790-52086176(+)
DB links


Entrez 18226
MGI 1351500
Ensembl ENSMUSG00000043858
Vega OTTMUSG00000021116
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
KEGG
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2014782
(v2.0)
Nup62NM_001171024,NM_010215,NM_05307418226
27.4991154.602338.928106.35571.3128140.34742.3182325.74864.5773141.3
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0014319
(v1.0)
Nup62Minor ZGA0.97747
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2014782
(v2.0)
Nup6218226
893/5340.2286497/534-0.2194949/5344.39972479/5343.539944/534-1.5223239/534-1.7528
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2014782
(v2.0)
Nup6218226
410/2080.4643213/208-0.0815670/2085.2091713/2084.356617/208-1.501374/208-2.068
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2014782
(v2.0)
Nup6218226
55.74413840.39
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2014782
(v2.0)
Nup6218226
9.63968810.95
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0014319
(v1.0)
Nup62NM_001171024,NM_010215,NM_05307418226
160.758235.27479.22749.483630.1642
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0014319
(v1.0)
Nup62NM_001171024,NM_010215,NM_05307418226
192.996254.68488.70356.780234.7078
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0014319
(v1.0)
Nup62NM_001171024,NM_010215,NM_05307418226
168.08710.0568256.689
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0014319
(v1.0)
Nup62NM_001171024,NM_010215,NM_05307418226
164.07232.911241.302
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0014319
(v1.0)
Nup62NM_001171024,NM_010215,NM_05307418226
258.595270.664
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0014319
(v1.0)
Nup62NM_001171024,NM_010215,NM_05307418226
168.1859.91901264.652
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0014319
(v1.0)
Nup62NM_001171024,NM_010215,NM_05307418226
73.351947.778444.8416
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0014319
(v1.0)
Nup62NM_001171024,NM_010215,NM_05307418226
56.166352.5717
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0014319
(v1.0)
Nup62NM_001171024,NM_010215,NM_05307418226
112.87193.2273
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0014319
(v1.0)
Nup62NM_001171024,NM_010215,NM_05307418226
116.819114.184
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0014319
(v1.0)
14984J0943E09-3Mm.22687Nup6218226
U008051NAP121891-001Nup62;TC874504Q63850U,F,23.93443.87783.07373.26083.03223.01213.0249
0014319
(v1.0)
17851L0022H10-3Mm.22687Nup6218226
U008051NAP121891-001Nup62;TC874504Q63850U,F,24.14273.99663.55573.71053.0423.28123.2212
MOE430 N/A
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0014319
(v1.0)
A_51_P190277Nup62NM_05307418226
11P0.8660.386P
Proteome N/A