DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0014325
GeneNup98
SynonymsNup96
Desc.nucleoporin 98
LocusNM_022979 chr7:109282717-109358634(-)
DB links


Entrez 269966
MGI 109404
Ensembl ENSMUSG00000063550
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
KEGG
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2014788
(v2.0)
Nup98NM_001287164,NM_001287165,NM_001287166,NM_001287167,NM_022979269966
73.5824135.427187.281121.66577.000811.081924.4536158.90466.454710.9461
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0014325
(v1.0)
Nup98269966
Maternal RNA0.97202
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2014788
(v2.0)
Nup98269966
664/3050.6079580/3050.809696/3054.73712424/3054.310531/305-1.2144136/305-1.7533
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2014788
(v2.0)
Nup98269966
388/1590.7705302/1590.8054651/1595.53081976/1594.944812/159-1.591951/159-2.2066
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2014788
(v2.0)
Nup98269966
21.94165837.83
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2014788
(v2.0)
Nup98269966
6.44344215.34
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0014325
(v1.0)
Nup98NM_022979269966
137.77126.28187.241151.76516.2272
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0014325
(v1.0)
Nup98FR141579,NM_022979269966
2860.161325.091489.28820.773237.013
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0014325
(v1.0)
Nup98NM_022979269966
144.05124.267137.776
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0014325
(v1.0)
Nup98NM_022979269966
140.608125.013113.921
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0014325
(v1.0)
Nup98FR141579,NM_022979269966
1885.121390.42
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0014325
(v1.0)
Nup98NM_022979269966
144.13523.9346124.944
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0014325
(v1.0)
Nup98NM_022979269966
80.771749.981144.4522
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0014325
(v1.0)
Nup98FR141579,NM_022979269966
194.817179.786
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0014325
(v1.0)
Nup98NM_022979269966
39.930637.8748
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0014325
(v1.0)
Nup98NM_022979269966
16.781118.9872
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0014325
(v1.0)
15406K0139A02-3Mm.41863AI849286101674
U028939NAP092864-001Nup98;TC865023Q9EQM8U,F,24.11084.24784.01934.08493.37833.66983.3736
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0014325
(v1.0)
1439154_atMm.439800Nup98NM_022979.1269966
365.775670.575267.5250100.5
0014325
(v1.0)
1434220_atMm.439800Nup98NM_022979.1269966
2328.3251758.651391.87500
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0014325
(v1.0)
A_51_P123613Nup98XM_620535269966
11P1.2740.249P
0014325
(v1.0)
A_52_P490272Nup98NM_022979269966
11P1.050.711P
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0014325
(v1.0)
Nup98269966
0.5200.520