DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0014331
GeneNusap1
SynonymsNuSAP
Desc.nucleolar and spindle associated protein 1
LocusNM_133851 chr2:119444034-119475896(+)
NM_001042652 chr2:119444034-119475896(+)
DB links


Entrez 108907
MGI 2675669
Ensembl ENSMUSG00000027306
Vega OTTMUSG00000015954
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2014794
(v2.0)
Nusap1NM_001042652,NM_133851108907
1.65079137.439177.94616.706412.766549.482616.5606161.61520.573264.132
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0014331
(v1.0)
Nusap1108907
Maternal RNA0.96876
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2014794
(v2.0)
Nusap1108907
508/2940.2753447/2940.4869118/2942.2379339/2941.528745/294-0.6386208/294-1.093
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2014794
(v2.0)
Nusap1108907
299/1470.5086210/1470.396115/1473.1449327/1472.464724/147-0.5383104/147-1.0875
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2014794
(v2.0)
Nusap1108907
32.597710929.91
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2014794
(v2.0)
Nusap1108907
9.93118611.55
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0014331
(v1.0)
Nusap1NM_001042652,NM_133851108907
142.794122.99412.43928.8652911.7095
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0014331
(v1.0)
Nusap1NM_001042652,NM_133851108907
168.603131.28713.43310.137813.6443
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0014331
(v1.0)
Nusap1NM_001042652,NM_133851108907
149.3050.603713134.189
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0014331
(v1.0)
Nusap1NM_001042652,NM_133851108907
145.736121.759119.546
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0014331
(v1.0)
Nusap1NM_001042652,NM_133851108907
133.324131.595
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0014331
(v1.0)
Nusap1NM_001042652,NM_133851108907
149.3910.595444131.114
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0014331
(v1.0)
Nusap1NM_001042652,NM_133851108907
11.51688.5597914.3732
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0014331
(v1.0)
Nusap1NM_001042652,NM_133851108907
10.028217.6755
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0014331
(v1.0)
Nusap1NM_001042652,NM_133851108907
115.97227.7629
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0014331
(v1.0)
Nusap1NM_001042652,NM_133851108907
1.670614.20648
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0014331
(v1.0)
11508H3117C02-3Mm.275842610201A12Rik108907
U002320NAP082078-1AW547774;TC920678,TC881527,TC806479Q9ERH4U,F,23.14923.59063.253.27933.18113.25093.2598
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0014331
(v1.0)
1416309_atMm.290015Nusap1NM_133851.3,NM_001042652.1108907
3376.2252522.4251120.25257.925455.4
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0014331
(v1.0)
A_51_P240453Nusap1NM_133851108907
11P0.710.181P
0014331
(v1.0)
A_52_P69281Nusap1BC009096108907
11P0.8190.334P
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0014331
(v1.0)
Nusap1108907
030040