DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0014400
GeneOdc1
SynonymsODC
Desc.ornithine decarboxylase, structural 1
LocusNM_013614 chr12:17551679-17558308(+)
DB links


Entrez 18263
MGI 97402
Ensembl ENSMUSG00000011179
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
KEGG
  •   3 Terms
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2014864
(v2.0)
Odc1NM_01361418263
242.19894.142347.2006726.7751619.97464.60380.075938.3771338.38632.637
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0014400
(v1.0)
Odc118263
Major ZGA0.99237
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2014864
(v2.0)
Odc118263
644/4120.1313482/4120.1099253/4122.8614757/4122.202187/412-0.1838620/412-0.0097
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2014864
(v2.0)
Odc118263
341/1680.506260/1680.5113246/1684.0565716/1683.403323/168-0.7849128/168-0.9833
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2014864
(v2.0)
Odc118263
74.152812658.85
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2014864
(v2.0)
Odc118263
19.77386729.51
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0014400
(v1.0)
Odc1NM_01361418263
97.846432.6673540.7251121.6657.361
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0014400
(v1.0)
Odc1NM_01361418263
166.124117.522917.4141746.62175.064
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0014400
(v1.0)
Odc1NM_01361418263
102.30788.574235.6407
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0014400
(v1.0)
Odc1NM_01361418263
99.862232.339328.4663
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0014400
(v1.0)
Odc1NM_01361418263
3.825163.05648
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0014400
(v1.0)
Odc1NM_01361418263
102.36787.361131.2209
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0014400
(v1.0)
Odc1NM_01361418263
500.6271083.01924.628
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0014400
(v1.0)
Odc1NM_01361418263
5713.425409.7
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0014400
(v1.0)
Odc1NM_01361418263
74.0742330.321
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0014400
(v1.0)
Odc1NM_01361418263
14.24539.33173
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0014400
(v1.0)
9248H3078F02-3Mm.34102Odc18263
U013795NAP104113-1Odc;TC824673P00860U,F,23.12773.16834.02194.55613.95554.17523.8131
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0014400
(v1.0)
1438761_a_atMm.34102Odc1NM_013614.218263
1386.251491.7253751.9758468.93263.625
0014400
(v1.0)
1427364_a_atMm.34102Odc1NM_013614.218263
263.301375.9254379.875983.35
0014400
(v1.0)
1437711_x_atMm.34102Odc1NM_013614.218263
1235.5251341.92744.35169.91747.025
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0014400
(v1.0)
A_51_P291347Odc1NM_01361418263
11P0.820.296P
0014400
(v1.0)
A_52_P436238Odc1NM_01361418263
11P0.7710.37P
0014400
(v1.0)
A_52_P7041Odc1NM_01361418263
11P0.7150.188P
Proteome N/A