DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0014402
GeneOdf2
Synonymscenexin
MMTEST29
Desc.outer dense fiber of sperm tails 2
LocusNM_001113214 chr2:29745240-29778058(+)
NM_001177659 chr2:29745240-29787266(+)
NM_001177661 chr2:29745240-29778058(+)
NM_001113213 chr2:29745240-29787266(+)
NM_013615 chr2:29745583-29778058(+)
DB links


Entrez 18286
MGI 1098824
Ensembl ENSMUSG00000026790
Vega OTTMUSG00000019165
Featureprotein-coding
GO(BP)
GO(MF)
  •   1 Terms
      structural constituent of cytoskeleton (GO:0005200)
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2014866
(v2.0)
Odf2NM_001113213,NM_001113214,NM_001177659,NM_001177661,NM_01361518286
1598.6135.244274.506515.664413.110640.26665.3645170.90229.7182943.2546
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0014402
(v1.0)
Odf218286
Minor ZGA0.98574
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2014866
(v2.0)
Odf218286
873/4890.3227494/489-0.1013983/4894.57452662/4893.76992/489-0.349558/489-0.408
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2014866
(v2.0)
Odf218286
452/2060.6184232/2060.055651/2065.18071432/2064.112131/206-0.6576193/206-0.6891
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2014866
(v2.0)
Odf218286
87.208719145.66
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2014866
(v2.0)
Odf218286
21.19112117.51
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0014402
(v1.0)
Odf2NM_001113213,NM_001113214,NM_001177659,NM_001177661,NM_01361518286
36.574251.765411.66999.095483.58482
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0014402
(v1.0)
Odf2NM_001113213,NM_001113214,NM_001177659,NM_001177661,NM_01361518286
182.573216.3363.566545.259423.4914
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0014402
(v1.0)
Odf2NM_001113213,NM_001113214,NM_001177659,NM_001177661,NM_01361518286
38.2417584.62856.4771
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0014402
(v1.0)
Odf2NM_001113213,NM_001113214,NM_001177659,NM_001177661,NM_01361518286
37.327751.245652.5825
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0014402
(v1.0)
Odf2NM_001113213,NM_001113214,NM_001177659,NM_001177661,NM_01361518286
414.521590.129
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0014402
(v1.0)
Odf2NM_001113213,NM_001113214,NM_001177659,NM_001177661,NM_01361518286
38.264576.62157.6707
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0014402
(v1.0)
Odf2NM_001113213,NM_001113214,NM_001177659,NM_001177661,NM_01361518286
10.80458.782046.79489
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0014402
(v1.0)
Odf2NM_001113213,NM_001113214,NM_001177659,NM_001177661,NM_01361518286
85.841765.7981
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0014402
(v1.0)
Odf2NM_001113213,NM_001113214,NM_001177659,NM_001177661,NM_01361518286
105.41313.2177
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0014402
(v1.0)
Odf2NM_001113213,NM_001113214,NM_001177659,NM_001177661,NM_01361518286
12.25134.6207
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0014402
(v1.0)
12744H3151F04-5Odf218286
U042271NAP021930-001TC886646,TC886639,TC843900,TC843896,TC843895O35135U,F,22.56982.58462.5122.45692.49592.38162.5531
0014402
(v1.0)
15381K0133C05-3Mm.663Odf218286
U042271NAP021930-001TC886640,TC886639,TC843895O35135U,F,22.98543.12593.00263.05592.35362.6642.7953
0014402
(v1.0)
22112L0941G06-3U042272NAP030988-1Odf2;O35135U,F,22.93422.86862.6132.96083.12533.09063.0436
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0014402
(v1.0)
1426040_a_atMm.330116Odf2NM_001113213.1,NM_001177659.1,NM_001113214.1,NM_001177662.1,NM_013615.3,NM_001177661.118286
76.7250116.97500
0014402
(v1.0)
1454735_atMm.330116Odf2NM_001113213.1,NM_001177659.1,NM_001113214.1,NM_001177662.1,NM_013615.3,NM_001177661.118286
572.45770.275787.250248.925
0014402
(v1.0)
1435216_a_atMm.330116Odf2NM_001113213.1,NM_001177659.1,NM_001113214.1,NM_001177662.1,NM_013615.3,NM_001177661.118286
81.325089.6500
0014402
(v1.0)
1444101_atMm.330116Odf2NM_001113213.1,NM_001177659.1,NM_001113214.1,NM_001177662.1,NM_013615.3,NM_001177661.118286
0081.35172.175135.8
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0014402
(v1.0)
A_51_P174228Odf2BC05700118286
11P1.50.154P
0014402
(v1.0)
A_51_P266987Odf2NM_01361518286
11P0.7110.183P
0014402
(v1.0)
A_52_P618197Odf2BC05700118286
11P3.8480.0484P
Proteome N/A