DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0015564
GeneOmt2a
SynonymsOM2a
Desc.oocyte maturation, alpha
LocusNM_001111286 chr9:78159779-78161855(-)
NM_001164523 chr9:78159779-78162604(-)
DB links


Entrez 18379
MGI 106620
Ensembl ENSMUSG00000066463
Vega OTTMUSG00000037975
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2016028
(v2.0)
Omt2aNM_001111286,NM_00116452318379
0322.005820.352362.29663.417700.0445795315.81981.55570
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0015564
(v1.0)
Omt2a18379
Minor ZGA0.97741
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2016028
(v2.0)
Omt2a18379
372/312-0.2582289/312-0.225919/312-0.4175109/312-0.184397/3120.368758/3120.6796
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2016028
(v2.0)
Omt2a18379
161/128-0.1804102/128-0.43982/128-1.944619/128-1.374936/1280.2211343/1280.8178
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2016028
(v2.0)
Omt2a18379
57.05495996.7
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2016028
(v2.0)
Omt2a18379
27.91852996.27
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0015564
(v1.0)
Omt2aNM_001111286,NM_00116452318379
334.026567.097269.19944.00780.0341635
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0015564
(v1.0)
Omt2aNM_001111286,NM_00116452318379
7297.5312001.88863.611088.850.0398127
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0015564
(v1.0)
Omt2aNM_001111286,NM_00116452318379
349.2550618.715
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0015564
(v1.0)
Omt2aNM_001111286,NM_00116452318379
340.907561.403233.582
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0015564
(v1.0)
Omt2aNM_001111286,NM_00116452318379
1209.38333.163
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0015564
(v1.0)
Omt2aNM_001111286,NM_00116452318379
349.4580256.185
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0015564
(v1.0)
Omt2aNM_001111286,NM_00116452318379
249.23642.491256.2289
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0015564
(v1.0)
Omt2aNM_001111286,NM_00116452318379
47.942464.7716
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0015564
(v1.0)
Omt2aNM_001111286,NM_00116452318379
279.445243.743
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0015564
(v1.0)
Omt2aNM_001111286,NM_00116452318379
947.4561323.13
NIA60mer N/A
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0015564
(v1.0)
1437732_atMm.335311Omt2aNM_001111286.2,NM_001164523.118379
935.352120.5252973.07542.850
Agilent44K N/A
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0015564
(v1.0)
Omt2a18379
031041