DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0015579
GeneOphn1
Synonyms
Desc.oligophrenin 1
LocusNM_052976 chrX:95752854-96086324(-)
DB links


Entrez 94190
MGI 2151070
Ensembl ENSMUSG00000031214
Vega OTTMUSG00000018075
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2016045
(v2.0)
Ophn1NM_05297694190
5.3220234.656342.281210.73544.540260.4729974.7828431.62385.100080.316014
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0015579
(v1.0)
Ophn194190
Maternal RNA0.93582
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2016045
(v2.0)
Ophn194190
301/2050.0411243/2050.128574/2052.0674288/2051.8091137/2051.4578919/2051.5604
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2016045
(v2.0)
Ophn194190
162/990.1958103/99-0.058573/993.0144257/992.676979/991.6909564/991.9002
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2016045
(v2.0)
Ophn194190
31.87227542.5
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2016045
(v2.0)
Ophn194190
12.30085522.37
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0015579
(v1.0)
Ophn1NM_05297694190
36.018629.27788.002363.154513.31055
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0015579
(v1.0)
Ophn1NM_05297694190
100.588165.76820.211813.27948.55383
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0015579
(v1.0)
Ophn1NM_05297694190
37.66081.9463231.9427
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0015579
(v1.0)
Ophn1NM_05297694190
36.760728.983823.4291
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0015579
(v1.0)
Ophn1NM_05297694190
83.755563.315
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0015579
(v1.0)
Ophn1NM_05297694190
37.68271.9196625.6962
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0015579
(v1.0)
Ophn1NM_05297694190
7.408943.04583.53861
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0015579
(v1.0)
Ophn1NM_05297694190
17.026514.6211
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0015579
(v1.0)
Ophn1NM_05297694190
18.53243.73671
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0015579
(v1.0)
Ophn1NM_05297694190
0.757971.40503
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0015579
(v1.0)
20323L0538E03-3Mm.100064Ophn194190
U039561NAP092590-001Ophn1;TC926392Q99J31U,F,23.7653.90163.80743.70773.89923.79463.8653
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0015579
(v1.0)
1419107_atMm.254336Ophn1NM_052976.394190
247.775171.85000
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0015579
(v1.0)
A_51_P161724Ophn1NM_05297694190
11P0.4360.11P
Proteome N/A