DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0015705
GenePabpc4
Synonyms
Desc.poly(A) binding protein, cytoplasmic 4
LocusNM_130881 chr4:122960154-122976076(+)
NM_148917 chr4:122960528-122976064(+)
DB links


Entrez 230721
MGI 2385206
Ensembl ENSMUSG00000011257
Vega OTTMUSG00000008978
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
KEGG
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2016172
(v2.0)
Pabpc4NM_130881,NM_148917230721
2.088658.0368211.885524.887837.676543.35573.9978114.607625.050147.3138
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0015705
(v1.0)
Pabpc4230721
MGA0.98622
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2016172
(v2.0)
Pabpc4230721
482/341-0.0135342/341-0.111639/3410.4589158/3410.2199109/3410.408693/3410.4227
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2016172
(v2.0)
Pabpc4230721
174/970.3272119/970.17727/971.6385125/971.671757/971.2552346/971.2269
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2016172
(v2.0)
Pabpc4230721
69.30514946.51
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2016172
(v2.0)
Pabpc4230721
16.18359217.59
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0015705
(v1.0)
Pabpc4NM_130881,NM_148917230721
8.36998.3538418.518526.15992.82134
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0015705
(v1.0)
Pabpc4NM_130881,NM_148917230721
5.200897.5800518.712556.86663.91107
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0015705
(v1.0)
Pabpc4NM_130881,NM_148917230721
8.75150.7638399.11423
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0015705
(v1.0)
Pabpc4NM_130881,NM_148917230721
8.542338.2699610.8665
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0015705
(v1.0)
Pabpc4NM_130881,NM_148917230721
5.213646.02949
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0015705
(v1.0)
Pabpc4NM_130881,NM_148917230721
8.756590.75337711.9181
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0015705
(v1.0)
Pabpc4NM_130881,NM_148917230721
17.145225.258417.3466
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0015705
(v1.0)
Pabpc4NM_130881,NM_148917230721
68.774541.3678
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0015705
(v1.0)
Pabpc4NM_130881,NM_148917230721
10.025318.4259
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0015705
(v1.0)
Pabpc4NM_130881,NM_148917230721
9.499074.96991
NIA60mer N/A
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0015705
(v1.0)
1421046_a_atMm.277091Pabpc4NM_130881.2,NM_148917.2230721
474.8595.7751641.351379.85610.25
0015705
(v1.0)
1451296_x_atMm.277091Pabpc4NM_130881.2,NM_148917.2230721
476.45587.0251920.61834.75651.45
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0015705
(v1.0)
A_52_P278085Pabpc4NM_148917230721
11P1.440.17P
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0015705
(v1.0)
Pabpc4230721
10.47.2020120