DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0015722
GenePadi6
SynonymsePAD
Pad6
Padi5
Desc.peptidyl arginine deiminase, type VI
LocusNM_153106 chr4:140283270-140298558(-)
DB links


Entrez 242726
MGI 2655198
Ensembl ENSMUSG00000040935
Vega OTTMUSG00000010035
Featureprotein-coding
GO(BP)
  •   2 Terms
      cellular protein modification process (GO:0006464)
      peptidyl-citrulline biosynthetic process from peptidyl-arginine (GO:0018101)
GO(MF)
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2016189
(v2.0)
Padi6NM_153106242726
0.1872661462.91409.81167.957548.11830.4763720.13811518.78489.46760.552294
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0015722
(v1.0)
Padi6242726
Maternal RNA0.988
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2016189
(v2.0)
Padi6242726
654/513-0.1622340/513-0.707824/513-0.791669/513-1.5493144/5130.22321502/5130.9491
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2016189
(v2.0)
Padi6242726
301/242-0.1972141/242-0.890412/242-0.687937/242-1.354674/2420.3431825/2421.1667
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2016189
(v2.0)
Padi6242726
123.338713293.44
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2016189
(v2.0)
Padi6242726
58.75976491.81
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0015722
(v1.0)
Padi6NM_153106242726
1520.67284.54150.630433.29710.0972544
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0015722
(v1.0)
Padi6NM_153106242726
105261987.14384.243365.1820.445307
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0015722
(v1.0)
Padi6NM_153106242726
15900.0684852310.44
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0015722
(v1.0)
Padi6NM_153106242726
1552281.684384.987
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0015722
(v1.0)
Padi6NM_153106242726
1914.322584.57
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0015722
(v1.0)
Padi6NM_153106242726
1590.930.0675472422.241
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0015722
(v1.0)
Padi6NM_153106242726
46.875832.149662.5401
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0015722
(v1.0)
Padi6NM_153106242726
364.492634.67
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0015722
(v1.0)
Padi6NM_153106242726
180.6942.89503
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0015722
(v1.0)
Padi6NM_153106242726
113.56643.1552
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0015722
(v1.0)
8981H3075A04-3Mm.26128LOC242726242726
U025712NAP008141-001ePADTC942893U,F,23.70063.5053.4723.37983.50463.29173.3426
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0015722
(v1.0)
1437084_atMm.271661Padi6NM_153106.2242726
18815.15730.8751919.9670.8250
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0015722
(v1.0)
A_51_P448094Padi6NM_153106242726
11P1.4150.178P
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0015722
(v1.0)
Padi6242726
15912480176492536510755