DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0015725
GenePafah1b2
Synonymsmus[b]
PAF-AH 30
Pafahb
Desc.platelet-activating factor acetylhydrolase, isoform 1b, subunit 2
LocusNM_008775 chr9:45773394-45792954(-)
DB links


Entrez 18475
MGI 108415
Ensembl ENSMUSG00000003131
Featureprotein-coding
GO(BP)
GO(MF)
  •   5 Terms
      1-alkyl-2-acetylglycerophosphocholine esterase activity (GO:0003847)
      hydrolase activity (GO:0016787)
      protein homodimerization activity (GO:0042803)
      protein heterodimerization activity (GO:0046982)
      platelet-activating factor acetyltransferase activity (GO:0047179)
GO(CC)
KEGG
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2016192
(v2.0)
Pafah1b2NM_00877518475
48.38246.785017.9341447.793666.804314.689535.89727.2408752.59513.4323
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0015725
(v1.0)
Pafah1b218475
MGA0.97345
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2016192
(v2.0)
Pafah1b218475
671/3900.2694458/3900.1154783/3904.56421906/3903.611853/390-0.81287/390-1.0379
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2016192
(v2.0)
Pafah1b218475
359/1680.5799231/1680.3414754/1685.66851754/1684.69484/168-3.047956/168-2.1544
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2016192
(v2.0)
Pafah1b218475
46.687812936.19
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2016192
(v2.0)
Pafah1b218475
16.47169716.98
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0015725
(v1.0)
Pafah1b2NM_00877518475
7.051355.4786935.582546.348125.3598
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0015725
(v1.0)
Pafah1b2NM_00877518475
19.986613.13275.350392.774247.2784
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0015725
(v1.0)
Pafah1b2NM_00877518475
7.3728417.69395.97737
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0015725
(v1.0)
Pafah1b2NM_00877518475
7.196625.423685.36526
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0015725
(v1.0)
Pafah1b2NM_00877518475
6.136026.29491
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0015725
(v1.0)
Pafah1b2NM_00877518475
7.3771217.45165.88444
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0015725
(v1.0)
Pafah1b2NM_00877518475
32.943944.750936.3087
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0015725
(v1.0)
Pafah1b2NM_00877518475
53.623943.6937
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0015725
(v1.0)
Pafah1b2NM_00877518475
5.916133.1803
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0015725
(v1.0)
Pafah1b2NM_00877518475
2.722133.33078
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0015725
(v1.0)
3628C0837F05-3Mm.200859Pafah1b218475
U030807NAP002100-001Pafah1b2;TC852526,TC852521Q61206U,F,23.39983.31523.41063.54374.0853.67494.0247
0015725
(v1.0)
5693H3005F11-3Mm.200859Pafah1b218475
U030807NAP002100-001Pafah1b2;TC852521Q61206U,F,23.0252.93743.01913.04563.20493.13383.2285
0015725
(v1.0)
10183H3092C06-5Pafah1b218475
U030807NAP002100-001Pafah1b2;TC852521Q61206U,F,22.5112.48732.70842.6733.07582.75582.9487
0015725
(v1.0)
17011K0526B05-3Mm.168507U030807NAP018733-001Pafah1b2;TC927517Q61206U,F,22.25232.14062.27822.192.23972.27242.2681
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0015725
(v1.0)
1422791_atMm.200859Pafah1b2NM_008775.318475
00383.57500
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0015725
(v1.0)
A_51_P461844Pafah1b2NM_00877518475
11P0.1420.0325P
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0015725
(v1.0)
Pafah1b218475
1412113