DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0015764
GenePapd7
SynonymsLAK-1
Pols
TRF4
TRF4-1
Desc.PAP associated domain containing 7
LocusNM_001169131 chr13:69636837-69672742(-)
NM_198600 chr13:69636837-69672742(-)
DB links


Entrez 210106
MGI 2682295
Ensembl ENSMUSG00000034575
Vega OTTMUSG00000032573
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
KEGG
  •   1 Terms
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2016231
(v2.0)
Papd7NM_001169131,NM_198600210106
4.65595135.069219.22476.188713.99234.457215.85867241.03619.30223.96565
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0015764
(v1.0)
Papd7210106
Minor ZGA0.95971
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2016231
(v2.0)
Papd7210106
840/5230.1705450/523-0.3324134/5231.6141271/5230.381255/523-1.177375/523-1.0762
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2016231
(v2.0)
Papd7210106
437/1850.7242234/1850.2217122/1852.9205245/1851.722916/185-1.4182117/185-1.2496
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2016231
(v2.0)
Papd7210106
68.364416840.69
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2016231
(v2.0)
Papd7210106
3.6711963.82
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0015764
(v1.0)
Papd7NM_001169131,NM_198600210106
140.464151.65156.70749.693914.0863
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0015764
(v1.0)
Papd7NM_001169131,NM_198600210106
354.744206.34144.38811.81549.90682
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided N/A
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0015764
(v1.0)
Papd7NM_001169131,NM_198600210106
143.358150.128178.455
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0015764
(v1.0)
Papd7NM_001169131,NM_198600210106
633.249961.41
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided N/A
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0015764
(v1.0)
Papd7NM_001169131,NM_198600210106
52.50229.3598613.42
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0015764
(v1.0)
Papd7NM_001169131,NM_198600210106
44.14977.9729
Illumina_Oo-2C_FPKM_gene_guided N/A
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0015764
(v1.0)
Papd7NM_001169131,NM_198600210106
274.644214.416
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0015764
(v1.0)
11814H3123E04-3Mm.141945210106
U034934NAP122259-001TC929835O55131U,F,24.66874.91444.274.0673.17293.35483.358
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0015764
(v1.0)
1438003_atMm.315959Papd7NM_198600.2,NM_001169131.1210106
627.3614.75695.4497.625416.35
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0015764
(v1.0)
A_52_P380329PolsNM_198600210106
11P0.790.255P
Proteome N/A