DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0015918
GenePcf11
Synonyms
Desc.cleavage and polyadenylation factor subunit homolog (S. cerevisiae)
LocusNM_029078 chr7:99792222-99818422(-)
DB links


Entrez 74737
MGI 1919579
Ensembl ENSMUSG00000041328
Vega OTTMUSG00000029291
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
KEGG
  •   1 Terms
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2016389
(v2.0)
Pcf11NM_02907874737
6.499197.816687.3568129.404113.268615.94659.820946.4870612.584414.2328
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0015918
(v1.0)
Pcf1174737
2-Cell Transient0.9987
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2016389
(v2.0)
Pcf1174737
835/3920.5769591/3920.4751638/3924.2622433/3923.9565111/3920.2352568/392-0.0641
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2016389
(v2.0)
Pcf1174737
422/1770.7374270/1770.4907518/1775.05741572/1774.462641/177-0.051149/177-0.8413
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2016389
(v2.0)
Pcf1174737
46.163513135.24
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2016389
(v2.0)
Pcf1174737
18.703910118.52
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0015918
(v1.0)
Pcf11NM_02907874737
8.123235.090221.88899.202416.91668
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0015918
(v1.0)
Pcf11FR319382,NM_02907874737
258.749133.236485.99293.14364.585
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0015918
(v1.0)
Pcf11NM_02907874737
8.493582.376825.55352
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0015918
(v1.0)
Pcf11NM_02907874737
8.290575.039094.81395
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0015918
(v1.0)
Pcf11FR319382,NM_02907874737
55.139882.2664
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0015918
(v1.0)
Pcf11NM_02907874737
8.498512.344275.27978
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0015918
(v1.0)
Pcf11NM_02907874737
20.26578.88538.66835
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0015918
(v1.0)
Pcf11FR319382,NM_02907874737
46.365142.2732
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0015918
(v1.0)
Pcf11NM_02907874737
4.647799.65204
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0015918
(v1.0)
Pcf11NM_02907874737
1.28971.62987
NIA60mer N/A
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0015918
(v1.0)
1427159_atMm.288645Pcf11NM_029078.374737
0090.92592.6568.675
0015918
(v1.0)
1428724_atMm.288645Pcf11NM_029078.374737
00454.75295.75247.8
Agilent44K N/A
Proteome N/A