DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0015922
GenePcgf5
Synonyms
Desc.polycomb group ring finger 5
LocusNM_029508 chr19:36453557-36530694(+)
DB links


Entrez 76073
MGI 1923505
Ensembl ENSMUSG00000024805
Featureprotein-coding
GO(BP)
  •   2 Terms
GO(MF)
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2016393
(v2.0)
Pcgf5NM_02950876073
5.191485.711386.6337572.8889101.53710.4645.55153.73073152.48511.8149
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0015922
(v1.0)
Pcgf576073
MGA0.9628
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2016393
(v2.0)
Pcgf576073
603/473-0.1621382/473-0.423471/4730.8488203/4730.110491/473-0.317567/473-0.337
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2016393
(v2.0)
Pcgf576073
249/186-0.0915163/186-0.304815/186-0.029357/186-0.369353/1860.2416315/1860.1599
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2016393
(v2.0)
Pcgf576073
128.180713793.56
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2016393
(v2.0)
Pcgf576073
63.75926598.09
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0015922
(v1.0)
Pcgf5NM_02950876073
5.933454.6031754.306670.60553.92772
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0015922
(v1.0)
Pcgf5FR082290,FR260807,FR310028,FR359073,NM_02950876073
34.490336.0305370.963481.03121.2689
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0015922
(v1.0)
Pcgf5NM_02950876073
6.203971.898585.02216
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0015922
(v1.0)
Pcgf5NM_02950876073
6.055694.556952.75943
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0015922
(v1.0)
Pcgf5FR082290,FR260807,FR310028,FR359073,NM_02950876073
36.760915.8657
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0015922
(v1.0)
Pcgf5NM_02950876073
6.207581.872573.02644
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0015922
(v1.0)
Pcgf5NM_02950876073
50.279468.1724105.489
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0015922
(v1.0)
Pcgf5FR082290,FR260807,FR310028,FR359073,NM_02950876073
96.3051148.44
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0015922
(v1.0)
Pcgf5NM_02950876073
2.6040331.2914
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0015922
(v1.0)
Pcgf5NM_02950876073
3.125130.86826
NIA60mer N/A
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0015922
(v1.0)
1429564_atMm.381165Pcgf5NM_029508.376073
540.705329.9755031.42158.65
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0015922
(v1.0)
A_51_P407989Pcgf5NM_02950876073
11P0.6310.154P
Proteome N/A