DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0015923
GenePcgf6
SynonymsMBLR
Mel18 and Bmi1-like RING finger protein
Rnf134
Desc.polycomb group ring finger 6
LocusNM_027654 chr19:47108109-47125335(-)
DB links


Entrez 71041
MGI 1918291
Ensembl ENSMUSG00000025050
Featureprotein-coding
GO(BP)
  •   4 Terms
      negative regulation of transcription from RNA polymerase II promoter (GO:0000122)
      transcription, DNA-dependent (GO:0006351)
      regulation of transcription, DNA-dependent (GO:0006355)
      negative regulation of transcription, DNA-dependent (GO:0045892)
GO(MF)
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2016394
(v2.0)
Pcgf6NM_02765471041
3.57823138.232183.75376.314455.482924.81416.10637146.51245.573924.8511
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0015923
(v1.0)
Pcgf671041
Minor ZGA0.95926
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2016394
(v2.0)
Pcgf671041
765/4600.2206477/460-0.0637200/4602.3691562/4601.614986/460-0.3578674/460-0.0481
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2016394
(v2.0)
Pcgf671041
366/1660.6248200/1660.1517179/1663.6161480/1662.844426/166-0.5981212/166-0.2449
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2016394
(v2.0)
Pcgf671041
67.821815543.76
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2016394
(v2.0)
Pcgf671041
12.52129313.46
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0015923
(v1.0)
Pcgf6NM_02765471041
143.645126.57556.819838.39784.29682
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0015923
(v1.0)
Pcgf6NM_02765471041
354.097248.343140.87477.770712.9622
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0015923
(v1.0)
Pcgf6NM_02765471041
150.1941.30859138.096
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0015923
(v1.0)
Pcgf6NM_02765471041
146.605125.304108.332
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0015923
(v1.0)
Pcgf6NM_02765471041
491.858828.715
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0015923
(v1.0)
Pcgf6NM_02765471041
150.2821.29067118.815
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0015923
(v1.0)
Pcgf6NM_02765471041
52.606337.074631.5335
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0015923
(v1.0)
Pcgf6NM_02765471041
63.1539106.253
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0015923
(v1.0)
Pcgf6NM_02765471041
49.816971.8451
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0015923
(v1.0)
Pcgf6NM_02765471041
43.523971.5323
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0015923
(v1.0)
15834K0300D09-3Mm.381964933407A11Rik71041
U039123NAP099070-0014933407A11Rik;TC936628Q99NA9U,F,24.21874.12973.90994.35113.51583.68943.5002
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0015923
(v1.0)
1424081_atMm.35413Pcgf6NM_027654.271041
2027.952301.751761.175592.5292.8
0015923
(v1.0)
1454120_a_atMm.35413Pcgf6NM_027654.271041
49.5570.27553.927.1513.025
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0015923
(v1.0)
A_51_P297771Pcgf6NM_02765471041
11P0.6210.172P
0015923
(v1.0)
A_52_P412321Pcgf6NM_02765471041
11P0.8690.393P
Proteome N/A