DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0015957
GenePcyt1a
SynonymsCctalpha
CTalpha
CTP:phosphocholine cytidylyltransferase alpha
Ctpct
Cttalpha
Desc.phosphate cytidylyltransferase 1, choline, alpha isoform
LocusNM_009981 chr16:32431007-32475151(+)
NM_001163159 chr16:32431106-32475151(+)
NM_001163160 chr16:32431316-32475151(+)
DB links


Entrez 13026
MGI 88557
Ensembl ENSMUSG00000005615
Vega OTTMUSG00000025786
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
KEGG
  •   2 Terms
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2016430
(v2.0)
Pcyt1aNM_001163159,NM_001163160,NM_00998113026
36.598542.208678.975395.851166.95515.6510718.976686.398663.77195.75981
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0015957
(v1.0)
Pcyt1a13026
Major ZGA0.95716
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2016430
(v2.0)
Pcyt1a13026
776/3940.464614/3940.52271205/3945.17133466/3944.459546/394-1.0248298/394-0.9986
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2016430
(v2.0)
Pcyt1a13026
431/1720.8089297/1720.6687992/1726.03212474/1725.157321/172-0.9436124/172-1.0623
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2016430
(v2.0)
Pcyt1a13026
54.026612642.88
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2016430
(v2.0)
Pcyt1a13026
9.82227912.43
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0015957
(v1.0)
Pcyt1aNM_001163159,NM_001163160,NM_00998113026
43.8754.674671.31546.427313.3874
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0015957
(v1.0)
Pcyt1aNM_001163159,NM_001163160,NM_00998113026
53.263460.031480.792253.761315.5116
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0015957
(v1.0)
Pcyt1aNM_001163159,NM_001163160,NM_00998113026
45.870213.384659.6511
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0015957
(v1.0)
Pcyt1aNM_001163159,NM_001163160,NM_00998113026
44.773854.125663.9333
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0015957
(v1.0)
Pcyt1aNM_001163159,NM_001163160,NM_00998113026
60.959472.91
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0015957
(v1.0)
Pcyt1aNM_001163159,NM_001163160,NM_00998113026
45.896813.201270.1199
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0015957
(v1.0)
Pcyt1aNM_001163159,NM_001163160,NM_00998113026
66.026644.827444.0083
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0015957
(v1.0)
Pcyt1aNM_001163159,NM_001163160,NM_00998113026
53.180552.3046
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0015957
(v1.0)
Pcyt1aNM_001163159,NM_001163160,NM_00998113026
32.044322.2588
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0015957
(v1.0)
Pcyt1aNM_001163159,NM_001163160,NM_00998113026
1.575792.60417
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0015957
(v1.0)
6271H3022C01-3Pcyt1a13026
U017024NAP056649-1Pcyt1a;TC887159P49586U,F,22.8752.95463.10473.25452.63112.78122.7516
0015957
(v1.0)
12519H3145B05-3Mm.6161Pcyt1a13026
U017024NAP116149-1Pcyt1a;TC887159,TC870476P49586U,F,23.23583.05883.38353.25043.67743.46883.4795
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0015957
(v1.0)
1421957_a_atMm.98775Pcyt1aNM_001163159.1,NM_001163160.1,NM_009981.413026
314.175207.8251.213067.775
0015957
(v1.0)
1438011_atMm.98775Pcyt1aNM_001163159.1,NM_001163160.1,NM_009981.413026
157.55186.6375.1167.87574.225
0015957
(v1.0)
1424453_atMm.98775Pcyt1aNM_001163159.1,NM_001163160.1,NM_009981.413026
052.250.87500
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0015957
(v1.0)
A_51_P294705Pcyt1aNM_00998113026
11P0.1460.055P
0015957
(v1.0)
A_52_P308881Pcyt1aAK04458513026
11P0.5190.115P
Proteome N/A