DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0015963
GenePdcd10
SynonymsCCM3
TF-1 cell apoptosis related protein-15
Tfa15
Desc.programmed cell death 10
LocusNM_019745 chr3:75320412-75360721(-)
DB links


Entrez 56426
MGI 1928396
Ensembl ENSMUSG00000027835
Vega OTTMUSG00000031048
Featureprotein-coding
GO(BP)
GO(MF)
  •   2 Terms
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2016436
(v2.0)
Pdcd10NM_01974556426
10.49325.226445.7782623.229644.548726.695625.35474.640333.871626.5127
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0015963
(v1.0)
Pdcd1056426
MGA0.99913
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2016436
(v2.0)
Pdcd1056426
573/3410.2353459/3410.3117134/3412.2138317/3411.219954/341-0.592316/341-0.7065
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2016436
(v2.0)
Pdcd1056426
329/1960.2333202/196-0.0723130/1962.9331297/1961.917314/196-1.680497/196-1.5991
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2016436
(v2.0)
Pdcd1056426
26.4111323.37
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2016436
(v2.0)
Pdcd1056426
9.1071959.59
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0015963
(v1.0)
Pdcd10NM_01974556426
5.552644.0768417.813731.870218.4371
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0015963
(v1.0)
Pdcd10NM_01974556426
2.532880.31619625.88843.590122.35977
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0015963
(v1.0)
Pdcd10NM_01974556426
5.80583.871954.44793
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0015963
(v1.0)
Pdcd10NM_01974556426
5.667034.035913.50873
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0015963
(v1.0)
Pdcd10NM_01974556426
0.319010.482357
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0015963
(v1.0)
Pdcd10NM_01974556426
5.809173.818923.84825
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0015963
(v1.0)
Pdcd10NM_01974556426
16.492730.77224.0197
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0015963
(v1.0)
Pdcd10NM_01974556426
3.551262.14274
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0015963
(v1.0)
Pdcd10NM_01974556426
5.4359935.6579
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0015963
(v1.0)
Pdcd10NM_01974556426
1.946332.00851
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0015963
(v1.0)
9365H3080B11-3Mm.28441Pdcd1056426
U024163NAP094812-001Pdcd10;TC881060Q9DAR3U,F,22.45752.68143.0182.8742.91962.96873.0772
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0015963
(v1.0)
1448527_atMm.316473Pdcd10NM_019745.356426
242.15134.6603.075506.825601.65
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0015963
(v1.0)
A_52_P680495Pdcd10NM_01974556426
11P0.450.0801P
Proteome N/A