DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0016013
GenePdhb
Synonyms
Desc.pyruvate dehydrogenase (lipoamide) beta
LocusNM_024221 chr14:8998505-9005506(-)
DB links


Entrez 68263
MGI 1915513
Ensembl ENSMUSG00000021748
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
KEGG
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2016486
(v2.0)
PdhbNM_02422168263
52.108620.96227.328485.7801129.472164.78541.895522.9585113.927186.623
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0016013
(v1.0)
Pdhb68263
MGA0.97957
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2016486
(v2.0)
Pdhb68263
702/4500.1285455/450-0.1486/4503.67671297/4502.851548/450-1.1546358/450-0.9264
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2016486
(v2.0)
Pdhb68263
339/2200.1105226/220-0.077475/2204.63711197/2203.75996/220-2.943343/220-2.911
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2016486
(v2.0)
Pdhb68263
65.202914345.6
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2016486
(v2.0)
Pdhb68263
18.50349120.33
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0016013
(v1.0)
PdhbNM_02422168263
21.77718.911963.858689.747629.5632
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0016013
(v1.0)
PdhbNM_02422168263
53.294547.8367204.4263.87789.4565
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0016013
(v1.0)
PdhbNM_02422168263
22.769819.056620.6333
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0016013
(v1.0)
PdhbNM_02422168263
22.225618.72217.0139
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0016013
(v1.0)
PdhbNM_02422168263
21.938121.6703
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0016013
(v1.0)
PdhbNM_02422168263
22.783118.795618.6603
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0016013
(v1.0)
PdhbNM_02422168263
59.123186.654978.4119
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0016013
(v1.0)
PdhbNM_02422168263
172.92166.483
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0016013
(v1.0)
PdhbNM_02422168263
25.767498.399
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0016013
(v1.0)
PdhbNM_02422168263
25.63215.4334
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0016013
(v1.0)
11067H3107H10-3Mm.22676Pdhb68263
U035227NAP120916-001Pdhb;TC824743,TC824741Q99LW9U,F,22.99623.123.28323.38072.78223.23123.09
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0016013
(v1.0)
1416090_atMm.301527PdhbNM_024221.368263
482.6896.2251367.8752070.2252269.975
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0016013
(v1.0)
A_51_P321921PdhbNM_02422168263
11P0.6670.158P
0016013
(v1.0)
A_52_P568792PdhbNM_02422168263
11P0.6380.142P
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0016013
(v1.0)
Pdhb68263
69781820