DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0016035
GenePdpn
SynonymsGp38
OTS-8
PA2.26
RANDAM-2
T1a
T1alpha
Desc.podoplanin
LocusNM_010329 chr4:142857325-142889410(-)
DB links


Entrez 14726
MGI 103098
Ensembl ENSMUSG00000028583
Vega OTTMUSG00000010162
Featureprotein-coding
GO(BP)
GO(MF)
  •   4 Terms
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2016508
(v2.0)
PdpnNM_001290822,NM_01032914726
53.381698.026227.982823.842528.714861.887714.21626.718124.821886.9535
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0016035
(v1.0)
Pdpn14726
Maternal RNA0.99831
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2016508
(v2.0)
Pdpn14726
716/4760.076410/476-0.330820/476-0.9377210/4760.15339/4761.55982132/4761.5618
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2016508
(v2.0)
Pdpn14726
344/1950.3047211/195-0.002410/195-0.6339130/1950.7389235/1952.30261323/1952.1572
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2016508
(v2.0)
Pdpn14726
87.454814062.47
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2016508
(v2.0)
Pdpn14726
28.12177537.5
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0016035
(v1.0)
PdpnNM_01032914726
103.90519.508817.892420.279410.1322
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0016035
(v1.0)
PdpnNM_01032914726
125.42121.82925.579529.29311.6429
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0016035
(v1.0)
PdpnNM_01032914726
108.64219.909521.2845
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0016035
(v1.0)
PdpnNM_01032914726
106.04619.312919.9328
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0016035
(v1.0)
PdpnNM_01032914726
23.706523.6527
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0016035
(v1.0)
PdpnNM_01032914726
108.70519.636821.8616
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0016035
(v1.0)
PdpnNM_01032914726
16.565519.580617.5194
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0016035
(v1.0)
PdpnNM_01032914726
29.440525.4053
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0016035
(v1.0)
PdpnNM_01032914726
75.47996.70164
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0016035
(v1.0)
PdpnNM_01032914726
5.346624.276
NIA60mer N/A
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0016035
(v1.0)
1419309_atMm.2976PdpnNM_010329.214726
562.325611.625346.3379.625329.2
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0016035
(v1.0)
A_51_P520456Gp38NM_01032914726
11P1.240.447P
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0016035
(v1.0)
Pdpn14726
201201