DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0016038
GenePds5a
Synonyms
Desc.PDS5, regulator of cohesion maintenance, homolog A (S. cerevisiae)
LocusNM_001081321 chr5:66006499-66089095(-)
DB links


Entrez 71521
MGI 1918771
Ensembl ENSMUSG00000029202
Featureprotein-coding
GO(BP)
  •   1 Terms
      negative regulation of DNA replication (GO:0008156)
GO(MF)
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2016511
(v2.0)
Pds5aNM_00108132171521
11.91285.5174912.505383.116787.52589.0093637.71819.6938377.92545.70503
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0016038
(v1.0)
Pds5a71521
Major ZGA0.99572
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2016511
(v2.0)
Pds5a71521
637/3310.4305434/3310.2739112/3311.9986271/3311.037120/331-1.9386151/331-1.7216
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2016511
(v2.0)
Pds5a71521
377/1281.0398244/1280.8097109/1283.2518253/1282.29194/128-2.666565/128-1.555
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2016511
(v2.0)
Pds5a71521
42.050514129.82
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2016511
(v2.0)
Pds5a71521
13.291210812.31
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0016038
(v1.0)
Pds5aNM_00108132171521
5.733888.6372161.885160.675426.6833
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0016038
(v1.0)
Pds5aNM_00108132171521
7.5080412.095690.0543102.18345.1331
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0016038
(v1.0)
Pds5aNM_00108132171521
5.99534.356629.42338
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0016038
(v1.0)
Pds5aNM_00108132171521
5.8528.550487.17354
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0016038
(v1.0)
Pds5aNM_00108132171521
27.98122.8286
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0016038
(v1.0)
Pds5aNM_00108132171521
5.998784.296957.8677
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0016038
(v1.0)
Pds5aNM_00108132171521
57.29658.584553.8165
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0016038
(v1.0)
Pds5aNM_00108132171521
114.87493.129
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0016038
(v1.0)
Pds5aNM_00108132171521
7.226236.9064
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0016038
(v1.0)
Pds5aNM_00108132171521
0.2654960.534256
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0016038
(v1.0)
10134H3091E11-3Mm.15119030416H16Rik71521
U043846NAP025632-0019030416H16Rik;TC927753,TC896616,TC810683Q9D337U,F,23.94834.19744.52654.34714.01544.11013.9812
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0016038
(v1.0)
1425082_s_atMm.278974Pds5aNM_001081321.171521
029.475249.075174.7164.725
Agilent44K N/A
Proteome N/A