DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0016041
GenePdss2
Synonymskd
mDLP1
PLMP
Desc.prenyl (solanesyl) diphosphate synthase, subunit 2
LocusNM_001168289 chr10:42941292-43184688(+)
NM_027772 chr10:42941292-43160054(+)
DB links


Entrez 71365
MGI 1918615
Ensembl ENSMUSG00000038240
Vega OTTMUSG00000034999
Featureprotein-coding
GO(BP)
GO(MF)
  •   4 Terms
GO(CC)
KEGG
  •   1 Terms
      Terpenoid backbone biosynthesis (mmu00900)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2016514
(v2.0)
Pdss2NM_001168289,NM_02777271365
2.0958616.39226.716414.989818.16612.236775.552922.380915.16812.99195
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0016041
(v1.0)
Pdss271365
1-Cell Transient0.9667
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2016514
(v2.0)
Pdss271365
657/3840.2613477/3840.1962115/3841.8292258/3840.753737/384-1.2948285/384-1.0256
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2016514
(v2.0)
Pdss271365
309/1700.3474196/1700.0886109/1702.8736239/1701.807611/170-1.801569/170-1.8773
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2016514
(v2.0)
Pdss271365
34.489113625.36
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2016514
(v2.0)
Pdss271365
12.94788515.23
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0016041
(v1.0)
Pdss2NM_001168289,NM_02777271365
17.037418.392711.156812.57653.9371
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0016041
(v1.0)
Pdss2FR265096,NM_001168289,NM_02777271365
22.116221.480613.644415.41095.26142
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0016041
(v1.0)
Pdss2NM_001168289,NM_02777271365
17.81420.76647820.0668
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0016041
(v1.0)
Pdss2NM_001168289,NM_02777271365
17.388418.20816.5152
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0016041
(v1.0)
Pdss2FR265096,NM_001168289,NM_02777271365
21.817220.2445
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0016041
(v1.0)
Pdss2NM_001168289,NM_02777271365
17.82450.7559818.1133
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0016041
(v1.0)
Pdss2NM_001168289,NM_02777271365
10.329512.143110.4522
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0016041
(v1.0)
Pdss2FR265096,NM_001168289,NM_02777271365
15.244713.5966
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0016041
(v1.0)
Pdss2NM_001168289,NM_02777271365
7.61922.88358
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0016041
(v1.0)
Pdss2NM_001168289,NM_02777271365
2.533182.47652
NIA60mer N/A
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0016041
(v1.0)
1430723_atMm.363225Pdss2NM_027772.2,NM_001168289.171365
219.20000
0016041
(v1.0)
1444085_atMm.363225Pdss2NM_027772.2,NM_001168289.171365
570.350000
Agilent44K N/A
Proteome N/A