DBTMEE:0016043
| Gene | Pdxdc1 |
| Synonyms | |
| Description | pyridoxal-dependent decarboxylase domain containing 1 |
| Locus | NM_001039533 UCSC: chr16:13834023-13903228(-) OLP: chr16:13834023-13903228(-)
NM_053181 UCSC: chr16:13835793-13903228(-) OLP: chr16:13835793-13903228(-)
|
| DB links |
Entrez 94184
MGI 1920909
Ensembl ENSMUSG00000022680
Vega OTTMUSG00000024509
|
| Feature | protein-coding |
| GO_BP |
-
 1 Terms
|
| GO_MF |
-
4 Terms
|
| GO_CC | |
| KEGG | |
| Ver2_FPKM |
see DBTMEE:2016516 (v2.0)
|
| SPR_Histone_Erkek_5KaroundTSS |
N/A |
| SPR_Histone_Erkek_2KaroundTSS |
N/A |
| SPR_Methy_Kobayashi_5KaroundTSS |
N/A |
| SPR_Methy_Kobayashi_2KaroundTSS |
N/A |
| SOLiD_OocyteTo4C_FPKM_gene_guided |
| DBTMEE | Gene | RefSeq | Entrez | SPR_FPKM | Oo_FPKM | 1C_FPKM | 2C_FPKM | 4C_FPKM | MEF_FPKM |
|---|
0016043
(v1.0) | Pdxdc1 | NM_001039533,NM_053181 | 94184
| 34.5046 | 32.8219 | 23.2438 | 13.6462 | 13.4665 | |
|
| SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided |
| DBTMEE | Gene | RefSeq | Entrez | Oo_FPKM | SPR_FPKM | 1C_FPKM |
|---|
0016043
(v1.0) | Pdxdc1 | NM_001039533,NM_053181 | 94184
| 36.0777 | 47.0401 | 35.8094 |
|
| SOLiD_Partheno1C_FPKM_gene_guided |
| DBTMEE | Gene | RefSeq | Entrez | Oo_FPKM | 1C_FPKM | p1C_FPKM |
|---|
0016043
(v1.0) | Pdxdc1 | NM_001039533,NM_053181 | 94184
| 35.2155 | 32.4923 | 39.3638 |
|
| SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided |
| DBTMEE | Gene | RefSeq | Entrez | Oo_FPKM | SPR_FPKM | p1C_FPKM |
|---|
0016043
(v1.0) | Pdxdc1 | NM_001039533,NM_053181 | 94184
| 36.0987 | 46.3958 | 43.1729 |
|
| SOLiD_Partheno4C_FPKM_gene_guided |
| DBTMEE | Gene | RefSeq | Entrez | 2C_FPKM | 4C_FPKM | p4C_FPKM |
|---|
0016043
(v1.0) | Pdxdc1 | NM_001039533,NM_053181 | 94184
| 21.5201 | 13.176 | 13.8861 |
|
| Illumina_Oo_2C_FPKM_gene_guided |
| DBTMEE | Gene | RefSeq | Entrez | Oo_FPKM | 2C_FPKM |
|---|
0016043
(v1.0) | Pdxdc1 | NM_001039533,NM_053181 | 94184
| 46.1343 | 3.60721 |
|
| SOLiD_SC_Oo_REPLICA_FPKM_gene_guided |
| DBTMEE | Gene | RefSeq | Entrez | Oo_1_1 | Oo_2_1 |
|---|
0016043
(v1.0) | Pdxdc1 | NM_001039533,NM_053181 | 94184
| 7.31338 | 1.7343 |
|
| NIA60mer |
| DBTMEE | Array_Feature_Number | Oligo_Parent_Clone | Unigene | Gene | Entrez | U_Cluster | NAP_Cluster | Gene_U/NAP | TIGR | SwissProt | EST | Oo | 1C | 2C | 4C | 8C | Morula | Blastocyst |
|---|
0016043
(v1.0) | 12348 | H3141H01-5 | | AA415817 | 94184
| U036808 | NAP002070-001 | AA415817; | TC858486,TC822315,TC807683,TC794628 | Q99K01 | U,F,2 | 3.0539 | 2.9179 | 2.8964 | 2.9037 | 3.0845 | 2.9824 | 2.9864 |
0016043
(v1.0) | 16068 | K0325G05-3 | Mm.22635 | AA415817 | 94184
| | NAP106643-1 | Kiaa0251-hp | TC794628 | | | 3.8946 | 3.8563 | 3.9772 | 3.8999 | 3.9698 | 3.992 | 3.9794 |
|
| MOE430 |
| DBTMEE | Probe_ID | Unigene | Gene | RefSeq | Entrez | Oo | 1C | 2C | 8C | Blastocyst |
|---|
0016043
(v1.0) | 1452705_at | Mm.171484 | Pdxdc1 | NM_001039533.1,NM_053181.2 | 94184
| 212.325 | 0 | 204.2 | 0 | 73.075 |
0016043
(v1.0) | 1436372_a_at | Mm.171484 | Pdxdc1 | NM_001039533.1,NM_053181.2 | 94184
| 57.15 | 0 | 0 | 0 | 0 |
0016043
(v1.0) | 1419327_at | Mm.171484 | Pdxdc1 | NM_001039533.1,NM_053181.2 | 94184
| 0 | 0 | 142.225 | 0 | 231.975 |
|
| Agilent44K |
| DBTMEE | Probe_ID | Gene | Acc | Entrez | Oo1_xFold | Oo1_pVal | Oo1_Flag | Oo2_xFold | Oo2_pVal | Oo2_Flag |
|---|
0016043
(v1.0) | A_51_P238557 | AA415817 | NM_053181 | 94184
| 1 | 1 | P | 0.724 | 0.195 | P |
|
| Proteome |
| DBTMEE | Gene | Entrez | GV_seqCount | MII_seqCount | Zygote_seqCount | GV_specCount | MII_specCount | Zygote_specCount |
|---|
0016043
(v1.0) | Pdxdc1 | 94184
| 8 | 12 | 2 | 9 | 15 | 2 |
|
