DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0016053
GenePdzd8
SynonymsPdzk8
Desc.PDZ domain containing 8
LocusNM_001033222 chr19:59370574-59420270(-)
DB links


Entrez 107368
MGI 2677270
Ensembl ENSMUSG00000074746
Featureprotein-coding
GO(BP)
GO(MF)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2016526
(v2.0)
Pdzd8NM_001033222107368
98.77510.856914.891918.995621.65095.5597719.665512.96120.52765.85237
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0016053
(v1.0)
Pdzd8107368
MGA0.97875
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2016526
(v2.0)
Pdzd8107368
1031/4340.7341699/4340.57031366/4345.21654002/4344.528356/434-0.8846510/434-0.3656
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2016526
(v2.0)
Pdzd8107368
619/1931.1644357/1930.7681033/1935.93472253/1934.858416/193-1.478166/193-0.8111
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2016526
(v2.0)
Pdzd8107368
31.624513423.6
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2016526
(v2.0)
Pdzd8107368
8.36091087.74
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0016053
(v1.0)
Pdzd8NM_001033222107368
11.283910.3114.140214.990713.8588
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0016053
(v1.0)
Pdzd8FR139635,FR263948,NM_001033222107368
13.984411.488716.602818.046617.803
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0016053
(v1.0)
Pdzd8NM_001033222107368
11.798336.12311.2484
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0016053
(v1.0)
Pdzd8NM_001033222107368
11.516310.20659.5882
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0016053
(v1.0)
Pdzd8FR139635,FR263948,NM_001033222107368
11.666510.9042
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0016053
(v1.0)
Pdzd8NM_001033222107368
11.805235.628310.516
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0016053
(v1.0)
Pdzd8NM_001033222107368
13.091714.474114.1707
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0016053
(v1.0)
Pdzd8FR139635,FR263948,NM_001033222107368
17.851817.6425
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0016053
(v1.0)
Pdzd8NM_001033222107368
12.13613.222
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0016053
(v1.0)
Pdzd8NM_001033222107368
1.142431.09247
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0016053
(v1.0)
16728K0446G04-3Mm.245166AW228944107368
U039193NAP098743-0011110037L13Rik;TC793582U,F,22.60752.9462.98693.13912.41262.65022.4183
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0016053
(v1.0)
1435440_atMm.485461Pdzd8NM_001033222.3107368
285.55283.8431.4720.1751136.975
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0016053
(v1.0)
A_52_P397444Pdzk8AK088487107368
11P1.4830.201P
Proteome N/A