DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0016085
GenePes1
Synonyms
Desc.pescadillo homolog 1, containing BRCT domain (zebrafish)
LocusNM_022889 chr11:3863978-3880007(+)
DB links


Entrez 64934
MGI 1890613
Ensembl ENSMUSG00000020430
Vega OTTMUSG00000005041
Featureprotein-coding
GO(BP)
  •   9 Terms
      mitotic metaphase (GO:0000089)
      maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) (GO:0000463)
      maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) (GO:0000466)
      rRNA processing (GO:0006364)
      nucleolus organization (GO:0007000)
      cell proliferation (GO:0008283)
      protein localization to organelle (GO:0033365)
      ribosome biogenesis (GO:0042254)
      regulation of cell cycle (GO:0051726)
GO(MF)
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2016561
(v2.0)
Pes1NM_02288964934
20.732777.282985.726884.0562106.425115.96457.650983.45285.9091144.95
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0016085
(v1.0)
Pes164934
MGA0.99889
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2016561
(v2.0)
Pes164934
641/459-0.0309430/459-0.2099167/4592.1134489/4591.4177129/4590.2248902/4590.3746
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2016561
(v2.0)
Pes164934
255/1720.055197/1720.0791157/1723.3802461/1722.735814/172-1.4961122/172-1.0854
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2016561
(v2.0)
Pes164934
50.594210747.28
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2016561
(v2.0)
Pes164934
8.81236114.45
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0016085
(v1.0)
Pes1NM_02288964934
80.357159.470562.574473.626941.1191
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0016085
(v1.0)
Pes1NM_02288964934
119.92392.470993.3077107.2249.8774
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0016085
(v1.0)
Pes1NM_02288964934
84.02077.5821864.8837
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0016085
(v1.0)
Pes1NM_02288964934
82.012558.873461.9704
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0016085
(v1.0)
Pes1NM_02288964934
87.358892.8449
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0016085
(v1.0)
Pes1NM_02288964934
84.06957.4783367.967
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0016085
(v1.0)
Pes1NM_02288964934
57.934171.089759.4621
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0016085
(v1.0)
Pes1NM_02288964934
37.557138.5781
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0016085
(v1.0)
Pes1NM_02288964934
38.781216.2064
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0016085
(v1.0)
Pes1NM_02288964934
20.487115.4972
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0016085
(v1.0)
11413H3115A03-3Pes164934
U012260NAP093463-001Pes1;TC868992Q9EQ61U,F,23.18993.24283.16453.27352.79043.26392.9961
0016085
(v1.0)
11711H3121H04-3Mm.28659Pes164934
U012260NAP093463-001Pes1;TC868992Q9EQ61U,F,22.94492.94033.29323.57193.34553.45513.3233
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0016085
(v1.0)
1416172_atMm.28659Pes1NM_022889.364934
307.225334.925356.125325.1274.325
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0016085
(v1.0)
A_51_P104456Pes1NM_02288964934
11P1.0740.603P
Proteome N/A