DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0016136
GenePgd
Synonyms
Desc.phosphogluconate dehydrogenase
LocusNM_001081274 chr4:148524094-148540816(-)
DB links


Entrez 110208
MGI 97553
Ensembl ENSMUSG00000028961
Vega OTTMUSG00000010934
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
KEGG
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2016612
(v2.0)
PgdNM_001081274110208
80.672611.815716.817679.2677112.33953.881566.861417.6114104.84956.5007
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0016136
(v1.0)
Pgd110208
MGA0.96776
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2016612
(v2.0)
Pgd110208
639/451-0.0101337/451-0.5351126/4511.7345257/4510.517523/451-2.1875128/451-2.4026
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2016612
(v2.0)
Pgd110208
297/1990.0646139/199-0.6299121/1992.8098241/1991.59549/199-2.286831/199-3.2202
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2016612
(v2.0)
Pgd110208
77.686815948.86
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2016612
(v2.0)
Pgd110208
25.927810125.67
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0016136
(v1.0)
PgdNM_001081274110208
12.285911.688358.991577.993747.3965
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0016136
(v1.0)
PgdNM_001081274110208
173.161157.7931142.881269.42914.742
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0016136
(v1.0)
PgdNM_001081274110208
12.84629.502812.7521
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0016136
(v1.0)
PgdNM_001081274110208
12.53911.570913.0588
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0016136
(v1.0)
PgdNM_001081274110208
80.068589.6047
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0016136
(v1.0)
PgdNM_001081274110208
12.853529.098714.3225
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0016136
(v1.0)
PgdNM_001081274110208
54.616975.306172.4635
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0016136
(v1.0)
PgdNM_001081274110208
206.373144.741
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0016136
(v1.0)
PgdNM_001081274110208
9.4048712.5751
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0016136
(v1.0)
PgdNM_001081274110208
9.840278.33748
NIA60mer N/A
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0016136
(v1.0)
1423706_a_atMm.252080PgdNM_001081274.1110208
56.37565.825238.325445.55582.95
0016136
(v1.0)
1436771_x_atMm.252080PgdNM_001081274.1110208
109.5148.725565.81435.3751789.375
0016136
(v1.0)
1437380_x_atMm.252080PgdNM_001081274.1110208
100.1123.35454.3751217.151723.975
0016136
(v1.0)
1438627_x_atMm.252080PgdNM_001081274.1110208
00283.125477.975584.9
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0016136
(v1.0)
A_52_P84096PgdBC011329110208
11P0.6330.138P
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0016136
(v1.0)
Pgd110208
10107131710