DBTMEE

DBTMEE
Database of Transcriptome in Mouse Early Embryos

DBTMEE:0016158

Gene

Pgs1

Synonyms

Description

phosphatidylglycerophosphate synthase 1

Locus

NM_133757 UCSC: chr11:117848171-117885325(+) OLP: chr11:117848171-117885325(+)

DB links

Entrez 74451
MGI 1921701
Ensembl ENSMUSG00000017715
Vega OTTMUSG00000003736

Feature

protein-coding

GO_BP

3 Terms

GO_MF

6 Terms

GO_CC

2 Terms

KEGG

2 Terms

see DBTMEE:2016634 (v2.0)

SPR_Histone_Erkek_5KaroundTSS

N/A

SPR_Histone_Erkek_2KaroundTSS

N/A

SPR_Methy_Kobayashi_5KaroundTSS

N/A

SPR_Methy_Kobayashi_2KaroundTSS

N/A

SOLiD_OocyteTo4C_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	SPR_FPKM	Oo_FPKM	1C_FPKM	2C_FPKM	4C_FPKM	MEF_FPKM
0016158 (v1.0)	Pgs1	NM_133757	74451	174.067	151.282	39.4634	33.1841	10.4133

SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_FPKM	SPR_FPKM	1C_FPKM
0016158 (v1.0)	Pgs1	NM_133757	74451	182.003	10.0962	165.052

SOLiD_Partheno1C_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_FPKM	1C_FPKM	p1C_FPKM
0016158 (v1.0)	Pgs1	NM_133757	74451	177.653	149.763	214.819

SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_FPKM	SPR_FPKM	p1C_FPKM
0016158 (v1.0)	Pgs1	NM_133757	74451	182.108	9.95793	235.607

SOLiD_Partheno4C_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	2C_FPKM	4C_FPKM	p4C_FPKM
0016158 (v1.0)	Pgs1	NM_133757	74451	36.537	32.0406	30.5738

Illumina_Oo_2C_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_FPKM	2C_FPKM
0016158 (v1.0)	Pgs1	NM_133757	74451	36.9303	12.309

SOLiD_SC_Oo_REPLICA_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_1_1	Oo_2_1
0016158 (v1.0)	Pgs1	NM_133757	74451	26.5299	13.1215

DBTMEE	Array_Feature_Number	Oligo_Parent_Clone	Unigene	Gene	Entrez	U_Cluster	NAP_Cluster	Gene_U/NAP	TIGR	SwissProt	EST	Oo	1C	2C	4C	8C	Morula	Blastocyst
0016158 (v1.0)	6255	H3022A04-3		4933424M23Rik	74451	U013613	NAP003399-001	4933424M23Rik;Saf;	TC914232,TC914229,TC914228	Q9D0G5	U,F,2	3.8538	3.8898	3.5123	3.8209	3.4011	3.5257	3.2694

DBTMEE	Probe_ID	Unigene	Gene	RefSeq	Entrez	Oo	1C	2C	8C	Blastocyst
0016158 (v1.0)	1454045_a_at	Mm.28864	Pgs1	NM_133757.2	74451	765.775	705.475	573.775	0	112.6
0016158 (v1.0)	1455229_x_at	Mm.28864	Pgs1	NM_133757.2	74451	660.525	751.375	451.85	0	0
0016158 (v1.0)	1430429_at	Mm.28864	Pgs1	NM_133757.2	74451	380.275	360.2	481.15	522.5	0

N/A

DBTMEE	Gene	Entrez	GV_seqCount	MII_seqCount	Zygote_seqCount	GV_specCount	MII_specCount	Zygote_specCount
0016158 (v1.0)	Pgs1	74451	15	26	9	20	59	16