DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0016158
GenePgs1
Synonyms
Desc.phosphatidylglycerophosphate synthase 1
LocusNM_133757 chr11:117848171-117885325(+)
DB links


Entrez 74451
MGI 1921701
Ensembl ENSMUSG00000017715
Vega OTTMUSG00000003736
Featureprotein-coding
GO(BP)
GO(MF)
  •   6 Terms
GO(CC)
KEGG
  •   2 Terms
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2016634
(v2.0)
Pgs1NM_13375774451
27.6071167.405217.64453.026247.94279.1855814.6893289.8844.105210.6216
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0016158
(v1.0)
Pgs174451
Maternal RNA0.96421
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2016634
(v2.0)
Pgs174451
670/476-0.0196392/476-0.395496/4761.2698245/4760.371462/476-0.8723650/476-0.1495
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2016634
(v2.0)
Pgs174451
299/1790.2262179/179-0.115588/1792.4984203/1791.499821/179-0.9998178/179-0.6032
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2016634
(v2.0)
Pgs174451
82.405614058.86
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2016634
(v2.0)
Pgs174451
14.16466820.83
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0016158
(v1.0)
Pgs1NM_13375774451
174.067151.28239.463433.184110.4133
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0016158
(v1.0)
Pgs1NM_13375774451
272.338198.00759.44155.976316.3508
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0016158
(v1.0)
Pgs1NM_13375774451
182.00310.0962165.052
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0016158
(v1.0)
Pgs1NM_13375774451
177.653149.763214.819
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0016158
(v1.0)
Pgs1NM_13375774451
193.013322.07
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0016158
(v1.0)
Pgs1NM_13375774451
182.1089.95793235.607
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0016158
(v1.0)
Pgs1NM_13375774451
36.53732.040630.5738
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0016158
(v1.0)
Pgs1NM_13375774451
55.373950.9353
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0016158
(v1.0)
Pgs1NM_13375774451
36.930312.309
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0016158
(v1.0)
Pgs1NM_13375774451
26.529913.1215
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0016158
(v1.0)
6255H3022A04-34933424M23Rik74451
U013613NAP003399-0014933424M23Rik;Saf;TC914232,TC914229,TC914228Q9D0G5U,F,23.85383.88983.51233.82093.40113.52573.2694
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0016158
(v1.0)
1454045_a_atMm.28864Pgs1NM_133757.274451
765.775705.475573.7750112.6
0016158
(v1.0)
1455229_x_atMm.28864Pgs1NM_133757.274451
660.525751.375451.8500
0016158
(v1.0)
1430429_atMm.28864Pgs1NM_133757.274451
380.275360.2481.15522.50
Agilent44K N/A
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0016158
(v1.0)
Pgs174451
15269205916