DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0016232
GenePicalm
Synonymsfit-1
fit1
Desc.phosphatidylinositol binding clathrin assembly protein
LocusNM_001252524 chr7:97278742-97357957(+)
NM_001252523 chr7:97278742-97357957(+)
NM_001252522 chr7:97278742-97357957(+)
NM_001252521 chr7:97278742-97357957(+)
NM_146194 chr7:97278742-97357957(+)
NM_001252520 chr7:97278742-97357957(+)
DB links


Entrez 233489
MGI 2385902
Ensembl ENSMUSG00000039361
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2016710
(v2.0)
PicalmNM_001252520,NM_001252521,NM_001252522,NM_001252523,NM_001252524,NM_146194233489
55.920438.317582.718857.75766.602229.114750.171661.622960.199530.9913
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0016232
(v1.0)
Picalm233489
Minor ZGA0.98707
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2016710
(v2.0)
Picalm233489
761/3350.6693558/3350.6184791/3354.79112140/3353.996526/335-1.5932157/335-1.6832
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2016710
(v2.0)
Picalm233489
437/1481.0442310/1480.9458756/1485.84211887/1484.98023/148-3.191767/148-1.7202
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2016710
(v2.0)
Picalm233489
46.301913833.55
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2016710
(v2.0)
Picalm233489
13.535310013.54
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0016232
(v1.0)
PicalmNM_146194233489
42.888360.77647.415951.003439.4101
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0016232
(v1.0)
PicalmFR083721,NM_146194233489
59.725983.980957.581973.832163.1337
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0016232
(v1.0)
PicalmNM_146194233489
44.843723.121666.3079
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0016232
(v1.0)
PicalmNM_146194233489
43.771960.165849.3584
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0016232
(v1.0)
PicalmFR083721,NM_146194233489
287.176328.694
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0016232
(v1.0)
PicalmNM_146194233489
44.869722.804954.1346
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0016232
(v1.0)
PicalmNM_146194233489
43.899749.245845.5411
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0016232
(v1.0)
PicalmFR083721,NM_146194233489
105.12182.9794
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0016232
(v1.0)
PicalmNM_146194233489
23.664515.9633
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0016232
(v1.0)
PicalmNM_146194233489
2.5140812.6281
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0016232
(v1.0)
6394H3024E01-3Mm.218602MGC19382233489
U008359NAP004351-001MGC19382;TC942084,TC888426,TC865302Q921L0U,F,23.11182.90212.92882.74562.40712.63572.62
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0016232
(v1.0)
1451316_a_atMm.235175PicalmNM_146194.3233489
437.725912.125795.675726.45832.575
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0016232
(v1.0)
A_51_P183400PicalmNM_146194233489
11P0.7510.214P
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0016232
(v1.0)
Picalm233489
331341