DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0016240
GenePigf
Synonyms
Desc.phosphatidylinositol glycan anchor biosynthesis, class F
LocusNM_008838 chr17:87396599-87424741(-)
DB links


Entrez 18701
MGI 99462
Ensembl ENSMUSG00000024145
Vega OTTMUSG00000024353
Featureprotein-coding
GO(BP)
GO(MF)
  •   1 Terms
      phosphotransferase activity, for other substituted phosphate groups (GO:0016780)
GO(CC)
KEGG
  •   2 Terms
      Glycosylphosphatidylinositol(GPI)-anchor biosynthesis (mmu00563)
      Metabolic pathways (mmu01100)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2016721
(v2.0)
PigfNM_00883818701
26.043990.8883151.8149.665441.26526.648812.0011100.43238.278931.2315
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0016240
(v1.0)
Pigf18701
Minor ZGA0.99975
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2016721
(v2.0)
Pigf18701
699/3180.6219566/3180.7138998/3185.19853349/3184.71736/318-1.0644153/318-1.6452
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2016721
(v2.0)
Pigf18701
439/1700.8521304/1700.719830/1705.79092217/1705.015722/170-0.862996/170-1.4097
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2016721
(v2.0)
Pigf18701
63.362414842.81
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2016721
(v2.0)
Pigf18701
21.398710420.58
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0016240
(v1.0)
PigfNM_00883818701
94.467104.59536.999428.67498.60107
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0016240
(v1.0)
PigfNM_00883818701
409.484275.934233.809217.41436.8818
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0016240
(v1.0)
PigfNM_00883818701
98.77399.52451114.116
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0016240
(v1.0)
PigfNM_00883818701
96.4132103.54574.2124
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0016240
(v1.0)
PigfNM_00883818701
186.936104.519
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0016240
(v1.0)
PigfNM_00883818701
98.83139.3940681.3937
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0016240
(v1.0)
PigfNM_00883818701
34.255727.686726.3981
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0016240
(v1.0)
PigfNM_00883818701
209.504160.025
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0016240
(v1.0)
PigfNM_00883818701
39.860310.8112
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0016240
(v1.0)
PigfNM_00883818701
306.987348.195
NIA60mer N/A
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0016240
(v1.0)
1448896_atMm.219685PigfNM_008838.118701
2510.55033.9751673.175311.875557.775
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0016240
(v1.0)
A_51_P264053PigfNM_00883818701
11P0.8690.394P
Proteome N/A