DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0016251
GenePigs
SynonymsLOC245087
LOC276846
Desc.phosphatidylinositol glycan anchor biosynthesis, class S
LocusNM_201406 chr11:78141924-78156278(+)
DB links


Entrez 276846
MGI 2687325
Ensembl ENSMUSG00000041958
Vega OTTMUSG00000000097
Featureprotein-coding
GO(BP)
  •   2 Terms
GO(MF)
  •   1 Terms
GO(CC)
KEGG
  •   2 Terms
      Glycosylphosphatidylinositol(GPI)-anchor biosynthesis (mmu00563)
      Metabolic pathways (mmu01100)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2016732
(v2.0)
PigsNM_201406276846
25.966616.80818.357545.916715.6061214.323229.77979.797945.5224512.294
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0016251
(v1.0)
Pigs276846
Maternal RNA0.97816
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2016732
(v2.0)
Pigs276846
654/478-0.0604361/478-0.519992/4781.2032188/478-0.014928/478-1.9976290/478-1.3158
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2016732
(v2.0)
Pigs276846
305/1940.1393156/194-0.428183/1942.3059175/1941.172214/194-1.6659110/194-1.4056
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2016732
(v2.0)
Pigs276846
108.128317860.75
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2016732
(v2.0)
Pigs276846
17.33168221.14
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0016251
(v1.0)
PigsNM_201406276846
17.48085.79994.404883.8906121.0822
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0016251
(v1.0)
PigsNM_201406276846
200.05169.157445.729253.1227220.778
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0016251
(v1.0)
PigsNM_201406276846
18.27789.496266.32781
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0016251
(v1.0)
PigsNM_201406276846
17.8415.741667.26756
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0016251
(v1.0)
PigsNM_201406276846
10.693638.6697
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0016251
(v1.0)
PigsNM_201406276846
18.28849.366197.97081
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0016251
(v1.0)
PigsNM_201406276846
4.078233.756543.84061
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0016251
(v1.0)
PigsNM_201406276846
40.295329.2176
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0016251
(v1.0)
PigsNM_201406276846
3.261651.81552
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0016251
(v1.0)
PigsNM_201406276846
3.344041.22908
NIA60mer N/A
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0016251
(v1.0)
1433429_atMm.295908PigsNM_201406.1276846
117.17598.225103.3595.82587.875
0016251
(v1.0)
1457640_x_atMm.295908PigsNM_201406.1276846
699.925849.10661.325688.45
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0016251
(v1.0)
A_52_P648304PigsNM_201406276846
11P0.7380.205P
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0016251
(v1.0)
Pigs276846
611013140