DBTMEE

DBTMEE
Database of Transcriptome in Mouse Early Embryos

DBTMEE:0016270

Gene

Pik3cd

Synonyms

p110delta

Description

phosphatidylinositol 3-kinase catalytic delta polypeptide

Locus

NM_001164049 UCSC: chr4:149023277-149072817(-) OLP: chr4:149023277-149072817(-)
NM_001164052 UCSC: chr4:149023277-149037425(-) OLP: chr4:149023277-149037425(-)
NM_008840 UCSC: chr4:149023277-149072817(-) OLP: chr4:149023277-149072817(-)
NM_001164051 UCSC: chr4:149023277-149050198(-) OLP: chr4:149023277-149050198(-)
NM_001164050 UCSC: chr4:149023277-149072817(-) OLP: chr4:149023277-149072817(-)
NM_001029837 UCSC: chr4:149023277-149075738(-) OLP: chr4:149023277-149075738(-)

DB links

Entrez 18707
MGI 1098211
Ensembl ENSMUSG00000039936
Vega OTTMUSG00000010264

Feature

protein-coding

GO_BP

10 Terms

GO_MF

7 Terms

GO_CC

1 Terms

KEGG

42 Terms

see DBTMEE:2016750 (v2.0)

SPR_Histone_Erkek_5KaroundTSS

N/A

SPR_Histone_Erkek_2KaroundTSS

N/A

SPR_Methy_Kobayashi_5KaroundTSS

N/A

SPR_Methy_Kobayashi_2KaroundTSS

N/A

SOLiD_OocyteTo4C_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	SPR_FPKM	Oo_FPKM	1C_FPKM	2C_FPKM	4C_FPKM	MEF_FPKM
0016270 (v1.0)	Pik3cd	NM_001029837,NM_001164049,NM_001164050,NM_001164051,NM_001164052,NM_008840	18707	178.676	203.556	25.7211	6.37631	0.460535

SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_FPKM	SPR_FPKM	1C_FPKM
0016270 (v1.0)	Pik3cd	NM_001029837,NM_001164049,NM_001164050,NM_001164051,NM_001164052,NM_008840	18707	186.822	5.90127	222.084

SOLiD_Partheno1C_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_FPKM	1C_FPKM	p1C_FPKM
0016270 (v1.0)	Pik3cd	NM_001029837,NM_001164049,NM_001164050,NM_001164051,NM_001164052,NM_008840	18707	182.357	201.512	315.651

SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_FPKM	SPR_FPKM	p1C_FPKM
0016270 (v1.0)	Pik3cd	NM_001029837,NM_001164049,NM_001164050,NM_001164051,NM_001164052,NM_008840	18707	186.931	5.82044	346.196

SOLiD_Partheno4C_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	2C_FPKM	4C_FPKM	p4C_FPKM
0016270 (v1.0)	Pik3cd	NM_001029837,NM_001164049,NM_001164050,NM_001164051,NM_001164052,NM_008840	18707	23.8138	6.15658	9.48156

Illumina_Oo_2C_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_FPKM	2C_FPKM
0016270 (v1.0)	Pik3cd	NM_001029837,NM_001164049,NM_001164050,NM_001164051,NM_001164052,NM_008840	18707	141.468	12.5597

SOLiD_SC_Oo_REPLICA_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_1_1	Oo_2_1
0016270 (v1.0)	Pik3cd	NM_001029837,NM_001164049,NM_001164050,NM_001164051,NM_001164052,NM_008840	18707	5.33688	2.27854

DBTMEE	Array_Feature_Number	Oligo_Parent_Clone	Unigene	Gene	Entrez	U_Cluster	NAP_Cluster	Gene_U/NAP	TIGR	SwissProt	EST	Oo	1C	2C	4C	8C	Morula	Blastocyst
0016270 (v1.0)	616	C0121B03-3	Mm.153755	Pik3cd	18707	U025808	NAP007576-001	Pik3cd;	TC836193	O35904	U,F,2	3.6303	3.8252	3.399	3.6142	2.4902	2.9552	3.2193

DBTMEE	Probe_ID	Unigene	Gene	RefSeq	Entrez	Oo	1C	2C	8C	Blastocyst
0016270 (v1.0)	1453281_at	Mm.229108	Pik3cd	NM_008840.3,NM_001164051.1,NM_001164049.1,NM_001164050.1,NM_001029837.2,NM_001164052.1	18707	332.05	206.4	215.475	0	0
0016270 (v1.0)	1458321_at	Mm.229108	Pik3cd	NM_008840.3,NM_001164051.1,NM_001164049.1,NM_001164050.1,NM_001029837.2,NM_001164052.1	18707	133.15	141.875	150.7	175.475	113.35
0016270 (v1.0)	1443798_at	Mm.229108	Pik3cd	NM_008840.3,NM_001164051.1,NM_001164049.1,NM_001164050.1,NM_001029837.2,NM_001164052.1	18707	2438.6	2577.68	2117.62	2214.38	1840.97

DBTMEE	Probe_ID	Gene	Acc	Entrez	Oo1_xFold	Oo1_pVal	Oo1_Flag	Oo2_xFold	Oo2_pVal	Oo2_Flag
0016270 (v1.0)	A_51_P142320	Pik3cd	U86587	18707	1	1	P	1.266	0.306	P
0016270 (v1.0)	A_52_P99848	Pik3cd	NM_008840	18707	1	1	P	0.629	0.135	P

DBTMEE	Gene	Entrez	GV_seqCount	MII_seqCount	Zygote_seqCount	GV_specCount	MII_specCount	Zygote_specCount
0016270 (v1.0)	Pik3cd	18707	3	14	0	3	16	0