DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0016279
GenePikfyve
SynonymsPip5k3
Desc.phosphoinositide kinase, FYVE finger containing
LocusNM_011086 chr1:65233259-65325270(+)
DB links


Entrez 18711
MGI 1335106
Ensembl ENSMUSG00000025949
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
KEGG
  •   4 Terms
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2016759
(v2.0)
PikfyveNM_01108618711
3.185537.5688211.614712.274313.79834.38485.802488.7992812.34224.05226
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0016279
(v1.0)
Pikfyve18711
MGA0.99273
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2016759
(v2.0)
Pikfyve18711
572/406-0.0182481/4060.1281102/4061.5797287/4060.827111/4060.1851662/4060.1057
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2016759
(v2.0)
Pikfyve18711
287/1960.0372217/1960.030597/1962.5144269/1961.77550/1960.0852292/196-0.0241
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2016759
(v2.0)
Pikfyve18711
49.595712539.68
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2016759
(v2.0)
Pikfyve18711
17.46999119.2
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0016279
(v1.0)
PikfyveNM_01108618711
7.864968.022769.133189.567854.06771
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0016279
(v1.0)
PikfyveNM_01108618711
183.25240.936189.812211.24123.323
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0016279
(v1.0)
PikfyveNM_01108618711
8.223541.164988.75301
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0016279
(v1.0)
PikfyveNM_01108618711
8.026997.94226.51138
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0016279
(v1.0)
PikfyveNM_01108618711
356.989589.799
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0016279
(v1.0)
PikfyveNM_01108618711
8.228321.149027.14146
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0016279
(v1.0)
PikfyveNM_01108618711
8.45599.238148.50556
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0016279
(v1.0)
PikfyveNM_01108618711
123.597127.955
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0016279
(v1.0)
PikfyveNM_01108618711
8.323997.59155
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0016279
(v1.0)
PikfyveNM_01108618711
1.032561.4859
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0016279
(v1.0)
835C0149A04-3Mm.38370Pip5k318711
U000382NAP041414-1Pip5k3;Pipk5k3;TC810969Q9CU94U,F,22.8572.67642.42532.55152.58962.47112.6601
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0016279
(v1.0)
1452994_atMm.38370PikfyveNM_011086.218711
0388.9750423.725510.95
Agilent44K N/A
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0016279
(v1.0)
Pip5k318711
001001