DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0016336
GenePkd2l2
SynonymsPolycystin - L2
TRPP5
Desc.polycystic kidney disease 2-like 2
LocusNM_016927 chr18:34569077-34602442(+)
NM_001163004 chr18:34569077-34601448(+)
DB links


Entrez 53871
MGI 1858231
Ensembl ENSMUSG00000014503
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2016817
(v2.0)
Pkd2l2NM_001163004,NM_01692753871
3.93887253.369456.70122.05925.817811.870150.191412420.16212.09542.11815
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0016336
(v1.0)
Pkd2l253871
Minor ZGA0.9858
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2016817
(v2.0)
Pkd2l253871
608/453-0.0881464/453-0.0814138/4531.8585464/4531.361182/4530.73691038/4530.5958
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2016817
(v2.0)
Pkd2l253871
276/1690.1938208/1690.1823126/1693.0888434/1692.67470/1690.7715397/1690.6297
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2016817
(v2.0)
Pkd2l253871
72.223713752.72
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2016817
(v2.0)
Pkd2l253871
24.77687732.18
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0016336
(v1.0)
Pkd2l2NM_001163004,NM_01692753871
263.321314.61816.42014.02340.124434
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0016336
(v1.0)
Pkd2l2NM_001163004,NM_01692753871
339.514375.99819.65514.842940.14291
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0016336
(v1.0)
Pkd2l2NM_001163004,NM_01692753871
275.3261.44047343.256
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0016336
(v1.0)
Pkd2l2NM_001163004,NM_01692753871
268.746311.459310.742
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0016336
(v1.0)
Pkd2l2NM_001163004,NM_01692753871
381.896371.494
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0016336
(v1.0)
Pkd2l2NM_001163004,NM_01692753871
275.4861.42074340.812
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0016336
(v1.0)
Pkd2l2NM_001163004,NM_01692753871
15.20253.884758.50251
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0016336
(v1.0)
Pkd2l2NM_001163004,NM_01692753871
4.7907310.4171
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0016336
(v1.0)
Pkd2l2NM_001163004,NM_01692753871
120.33126.9447
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0016336
(v1.0)
Pkd2l2NM_001163004,NM_01692753871
122.03208.268
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0016336
(v1.0)
3855C0903E12-3Mm.221590U038306NAP034957-1MGC37079;Pkd2l2;TC934348U,F,22.95682.85743.01852.91213.08312.98143.03
0016336
(v1.0)
17655L0004D04-3Mm.246321AW546153107049
U038306NAP001834-002MGC37079;Pkd2l2;TC826430U,F,23.01642.88783.00132.79742.9672.95142.9263
MOE430 N/A
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0016336
(v1.0)
A_52_P210909Pkd2l2NM_01692753871
11P0.980.871P
Proteome N/A