DBTMEE

DBTMEE
Database of Transcriptome in Mouse Early Embryos

DBTMEE:0016348

Gene

Pkn2

Synonyms

PRK2
Prkcl2
Stk7

Description

protein kinase N2

Locus

NM_178654 UCSC: chr3:142453866-142544968(-) OLP: chr3:142453866-142544968(-)

DB links

Entrez 109333
MGI 109211
Ensembl ENSMUSG00000004591
Vega OTTMUSG00000036912

Feature

protein-coding

GO_BP

14 Terms

GO_MF

10 Terms

GO_CC

11 Terms

KEGG

see DBTMEE:2016829 (v2.0)

SPR_Histone_Erkek_5KaroundTSS

N/A

SPR_Histone_Erkek_2KaroundTSS

N/A

SPR_Methy_Kobayashi_5KaroundTSS

N/A

SPR_Methy_Kobayashi_2KaroundTSS

N/A

SOLiD_OocyteTo4C_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	SPR_FPKM	Oo_FPKM	1C_FPKM	2C_FPKM	4C_FPKM	MEF_FPKM
0016348 (v1.0)	Pkn2	NM_178654	109333	57.2732	54.1803	61.7881	45.5964	19.2077

SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_FPKM	SPR_FPKM	1C_FPKM
0016348 (v1.0)	Pkn2	NM_178654	109333	59.8844	2.36916	59.1119

SOLiD_Partheno1C_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_FPKM	1C_FPKM	p1C_FPKM
0016348 (v1.0)	Pkn2	NM_178654	109333	58.4531	53.6363	44.2372

SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_FPKM	SPR_FPKM	p1C_FPKM
0016348 (v1.0)	Pkn2	NM_178654	109333	59.9192	2.33671	48.5178

SOLiD_Partheno4C_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	2C_FPKM	4C_FPKM	p4C_FPKM
0016348 (v1.0)	Pkn2	NM_178654	109333	57.2061	44.0251	40.5905

Illumina_Oo_2C_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_FPKM	2C_FPKM
0016348 (v1.0)	Pkn2	NM_178654	109333	18.6493	30.4765

SOLiD_SC_Oo_REPLICA_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_1_1	Oo_2_1
0016348 (v1.0)	Pkn2	NM_178654	109333	3.95816	11.786

DBTMEE	Array_Feature_Number	Oligo_Parent_Clone	Unigene	Gene	Entrez	U_Cluster	NAP_Cluster	Gene_U/NAP	TIGR	SwissProt	EST	Oo	1C	2C	4C	8C	Morula	Blastocyst
0016348 (v1.0)	4928	G0115C09-3	Mm.23935	6030436C20Rik	109333	U024714	NAP099065-001	6030436C20Rik;	TC942821,TC820779		U,F,2	3.231	3.4018	3.3216	3.5469	3.0608	3.3774	3.1723
0016348 (v1.0)	8142	H3060E04-3	Mm.23935	6030436C20Rik	109333	U024714	NAP099065-001	6030436C20Rik;	TC820779		U,F,2	3.7603	3.6023	2.8809	3.1491	2.7506	2.9344	3.0346

DBTMEE	Probe_ID	Unigene	Gene	RefSeq	Entrez	Oo	1C	2C	8C	Blastocyst
0016348 (v1.0)	1437295_at	Mm.244236	Pkn2	NM_178654.4	109333	984.675	1269.18	1786.9	817.05	880.15

DBTMEE	Probe_ID	Gene	Acc	Entrez	Oo1_xFold	Oo1_pVal	Oo1_Flag	Oo2_xFold	Oo2_pVal	Oo2_Flag
0016348 (v1.0)	A_51_P195947	Pkn2	NM_178654	109333	1	1	P	1.742	0.113	P
0016348 (v1.0)	A_52_P261160	Pkn2	NM_178654	109333	1	1	P	0.45	0.103	P
0016348 (v1.0)	A_52_P309423	Pkn2	AK082921	109333	1	1	P	0.46	0.0815	P

N/A