DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0016379
GenePlaa
SynonymsD4Ertd618e
Ufd3
Desc.phospholipase A2, activating protein
LocusNM_172695 chr4:94231830-94269938(-)
DB links


Entrez 18786
MGI 104810
Ensembl ENSMUSG00000028577
Vega OTTMUSG00000007850
Featureprotein-coding
GO(BP)
  •   2 Terms
GO(MF)
GO(CC)
KEGG
  •   1 Terms
      Protein processing in endoplasmic reticulum (mmu04141)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2016861
(v2.0)
PlaaNM_17269518786
6.7272748.097757.890228.154941.391217.332618.021439.849739.315517.8295
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0016379
(v1.0)
Plaa18786
Maternal RNA0.84403
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2016861
(v2.0)
Plaa18786
621/3430.3427418/3430.1686199/3432.7727411/3431.585253/343-0.6268274/343-0.9196
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2016861
(v2.0)
Plaa18786
344/1480.7003204/1480.3447192/1483.8704395/1482.726916/148-1.104266/148-1.7414
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2016861
(v2.0)
Plaa18786
40.820114029.16
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2016861
(v2.0)
Plaa18786
11.839310411.38
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0016379
(v1.0)
PlaaNM_17269518786
49.983939.948820.943828.73512.8194
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0016379
(v1.0)
PlaaFR003850,NM_17269518786
442.539291.805163.372251.979108.397
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0016379
(v1.0)
PlaaNM_17269518786
52.26282.4602343.585
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0016379
(v1.0)
PlaaNM_17269518786
51.013739.547729.5422
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0016379
(v1.0)
PlaaFR003850,NM_17269518786
553.155485.632
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0016379
(v1.0)
PlaaNM_17269518786
52.29322.4265332.4009
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0016379
(v1.0)
PlaaNM_17269518786
19.390727.744827.1808
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0016379
(v1.0)
PlaaFR003850,NM_17269518786
321.188352.282
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0016379
(v1.0)
PlaaNM_17269518786
40.05617.9412
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0016379
(v1.0)
PlaaNM_17269518786
11.194420.8246
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0016379
(v1.0)
2717C0355F11-3Mm.33764AI536418100172
U025266NAP001273-002Plaa;TC880913P27612U,F,23.53853.52862.82582.85453.31393.23413.3817
0016379
(v1.0)
5638H3004D02-3Mm.22724Plaa18786
Plaa3.68833.76793.96153.90973.75183.99213.9005
0016379
(v1.0)
16846K0509H03-3Mm.22724Plaa18786
U004505NAP039848-1P27612U,F,22.93922.65432.68552.70012.96512.83152.8375
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0016379
(v1.0)
1429707_atMm.485102PlaaNM_172695.218786
464.625620.925273.225342.225306.8
0016379
(v1.0)
1435001_atMm.485102PlaaNM_172695.218786
1049.151275.3447.5406.925899.55
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0016379
(v1.0)
A_51_P378348PlaaNM_17269518786
11P1.6730.128P
0016379
(v1.0)
A_52_P373782PlaaAK08502718786
11P0.3880.0775P
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0016379
(v1.0)
Plaa18786
3438218313550