DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0016389
GenePlat
SynonymsD8Ertd2e
t-PA
tPA
Desc.plasminogen activator, tissue
LocusNM_008872 chr8:23868216-23893320(+)
DB links


Entrez 18791
MGI 97610
Ensembl ENSMUSG00000031538
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
KEGG
  •   1 Terms
      Complement and coagulation cascades (mmu04610)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2016870
(v2.0)
PlatNM_00887218791
1.62705865.89161.315863.62648.52352.8717628.243266.859791.58054.25659
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0016389
(v1.0)
Plat18791
Maternal RNA0.99783
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2016870
(v2.0)
Plat18791
648/542-0.2546454/542-0.37134/542-0.3837211/542-0.0296253/5420.95331519/5420.8862
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2016870
(v2.0)
Plat18791
281/221-0.1655171/221-0.483626/2210.4909122/2210.4696137/2211.3515760/2211.179
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2016870
(v2.0)
Plat18791
62.520211056.84
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2016870
(v2.0)
Plat18791
25.68495844.28
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0016389
(v1.0)
PlatNM_00887218791
900.13642.515447.378633.688819.8512
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0016389
(v1.0)
PlatNM_00887218791
4454.96210.661270.008217.87480.5898
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0016389
(v1.0)
PlatNM_00887218791
941.1740.59502846.3852
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0016389
(v1.0)
PlatNM_00887218791
918.67942.088549.4829
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0016389
(v1.0)
PlatNM_00887218791
207.775232.429
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0016389
(v1.0)
PlatNM_00887218791
941.7210.58687854.2712
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0016389
(v1.0)
PlatNM_00887218791
43.865232.527963.8135
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0016389
(v1.0)
PlatNM_00887218791
246.045450.702
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0016389
(v1.0)
PlatNM_00887218791
173.6854.54976
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0016389
(v1.0)
PlatNM_00887218791
83.5951296.155
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0016389
(v1.0)
9391H3080E06-3Mm.170320U009174NAP021471-001Plat;TC802227P11214U,F,22.25752.48612.51412.39062.1662.35142.1671
0016389
(v1.0)
9424H3080H11-3Mm.154660Plat18791
U009174NAP008657-001Plat;TC874735P11214U,F,23.93493.40263.0522.9923.19123.11413.224
0016389
(v1.0)
15714K0229D06-3Mm.154660Plat18791
U043850NAP038845-1TC939445P11214U,F,22.64562.48682.3532.10722.37422.38952.3889
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0016389
(v1.0)
1415806_atMm.154660PlatNM_008872.218791
4157.32418.25288.15096.025
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0016389
(v1.0)
A_51_P301566PlatNM_00887218791
11P1.6760.121P
0016389
(v1.0)
A_52_P409833PlatNM_00887218791
11P1.1130.481P
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0016389
(v1.0)
Plat18791
01010171