DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0016503
GenePmm1
SynonymsSecp53 (yeast) homolog
Desc.phosphomannomutase 1
LocusNM_013872 chr15:81781536-81791297(-)
DB links


Entrez 29858
MGI 1353418
Ensembl ENSMUSG00000022474
Vega OTTMUSG00000028155
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
KEGG
  •   3 Terms
      Fructose and mannose metabolism (mmu00051)
      Amino sugar and nucleotide sugar metabolism (mmu00520)
      Metabolic pathways (mmu01100)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2016988
(v2.0)
Pmm1NM_001282040,NM_001282041,NM_01387229858
15.059529.771530.6965185.762293.023187.15326.058242.706253.298239.382
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0016503
(v1.0)
Pmm129858
Major ZGA0.98276
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2016988
(v2.0)
Pmm129858
636/4230.0754354/423-0.372176/4231.1025224/4230.41245/423-1.1573367/423-0.8017
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2016988
(v2.0)
Pmm129858
280/1750.1644144/175-0.394970/1752.2029200/1751.510511/175-1.842490/175-1.5428
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2016988
(v2.0)
Pmm129858
68.704714547.38
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2016988
(v2.0)
Pmm129858
15.57398119.23
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0016503
(v1.0)
Pmm1NM_01387229858
30.082521.4116139.578208.79218.3523
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0016503
(v1.0)
Pmm1NM_01387229858
39.672825.9979167.792267.15224.6831
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0016503
(v1.0)
Pmm1NM_01387229858
31.45415.8421723.3606
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0016503
(v1.0)
Pmm1NM_01387229858
30.702321.196732.188
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0016503
(v1.0)
Pmm1NM_01387229858
27.670439.0025
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0016503
(v1.0)
Pmm1NM_01387229858
31.47235.7621535.3027
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0016503
(v1.0)
Pmm1NM_01387229858
129.227201.597179.902
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0016503
(v1.0)
Pmm1NM_01387229858
264.261241.191
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0016503
(v1.0)
Pmm1NM_01387229858
3.1743744.5058
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0016503
(v1.0)
Pmm1NM_01387229858
7.777214.06494
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0016503
(v1.0)
9558H3083C04-3Mm.18939Pmm129858
U036442NAP011586-001Pmm1;TC926502,TC926500,TC882180,TC882178O35621U,F,22.85112.97633.23953.40853.14693.5252.9438
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0016503
(v1.0)
1424167_a_atMm.18939Pmm1NM_013872.329858
127.6103.525454.51369.65422.25
0016503
(v1.0)
1430780_a_atMm.18939Pmm1NM_013872.329858
000397.025137.4
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0016503
(v1.0)
A_51_P431107Pmm1NM_01387229858
11P1.1840.34P
0016503
(v1.0)
A_52_P4598Pmm1NM_01387229858
11P0.8610.42P
Proteome N/A