DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0016508
GenePmpcb
SynonymsMPP11
MPPP52
Desc.peptidase (mitochondrial processing) beta
LocusNM_028431 chr5:21242978-21262970(+)
DB links


Entrez 73078
MGI 1920328
Ensembl ENSMUSG00000029017
Vega OTTMUSG00000025637
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2016993
(v2.0)
PmpcbNM_02843173078
23.764114.93168.6656723.923347.465538.832348.02757.5647429.556549.0424
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0016508
(v1.0)
Pmpcb73078
MGA0.97834
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2016993
(v2.0)
Pmpcb73078
625/474-0.1136449/474-0.1939147/4741.8853457/4741.274147/474-1.2586456/474-0.6535
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2016993
(v2.0)
Pmpcb73078
307/226-0.0706198/226-0.3055140/2262.845409/2262.174619/226-1.4668132/226-1.365
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2016993
(v2.0)
Pmpcb73078
87.595216054.75
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2016993
(v2.0)
Pmpcb73078
22.8648825.98
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0016508
(v1.0)
PmpcbNM_02843173078
15.51435.9944417.797333.051634.5656
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0016508
(v1.0)
PmpcbNM_02843173078
103.75528.770542.0482223.235258.481
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0016508
(v1.0)
PmpcbNM_02843173078
16.22168.690766.54006
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0016508
(v1.0)
PmpcbNM_02843173078
15.83395.934255.62225
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0016508
(v1.0)
PmpcbNM_02843173078
11.023220.506
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0016508
(v1.0)
PmpcbNM_02843173078
16.23118.571736.1663
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0016508
(v1.0)
PmpcbNM_02843173078
16.477531.912620.4807
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0016508
(v1.0)
PmpcbNM_02843173078
61.311329.2877
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0016508
(v1.0)
PmpcbNM_02843173078
16.685415.8996
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0016508
(v1.0)
PmpcbNM_02843173078
1.80310.814057
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0016508
(v1.0)
1815C0259A11-3Mm.347743110004O18Rik73078
U005339NAP006418-0013110004O18Rik;TC886637,TC886635,TC886634,TC886633,TC886632Q9CXT83.15973.16273.7284.34633.84734.13734.0932
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0016508
(v1.0)
1429709_atMm.301655PmpcbNM_028431.273078
295.884.1143.425604.55783.45
0016508
(v1.0)
1433729_x_atMm.301655PmpcbNM_028431.273078
264.550135.5571.4671.05
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0016508
(v1.0)
A_51_P151038PmpcbBC08794373078
11P0.5010.0966P
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0016508
(v1.0)
Pmpcb73078
101101