DBTMEE:0016513
| Gene | Pnkd |
| Synonyms | Brp17 |
| Description | paroxysmal nonkinesiogenic dyskinesia |
| Locus | NM_025580 UCSC: chr1:74331608-74334027(+) OLP: chr1:74331608-74334027(+)
NM_001039509 UCSC: chr1:74331608-74400266(+) OLP: chr1:74331608-74400266(+)
NM_019999 UCSC: chr1:74379184-74400266(+) OLP: chr1:74379184-74400266(+)
|
| DB links |
Entrez 56695
MGI 1930773
Ensembl ENSMUSG00000026179
Vega OTTMUSG00000021729
|
| Feature | protein-coding |
| GO_BP |
-
 1 Terms
|
| GO_MF |
-
4 Terms
|
| GO_CC |
-
4 Terms
|
| KEGG | |
| Ver2_FPKM |
see DBTMEE:2016999 (v2.0)
|
| SPR_Histone_Erkek_5KaroundTSS |
N/A |
| SPR_Histone_Erkek_2KaroundTSS |
N/A |
| SPR_Methy_Kobayashi_5KaroundTSS |
N/A |
| SPR_Methy_Kobayashi_2KaroundTSS |
N/A |
| SOLiD_OocyteTo4C_FPKM_gene_guided |
| DBTMEE | Gene | RefSeq | Entrez | SPR_FPKM | Oo_FPKM | 1C_FPKM | 2C_FPKM | 4C_FPKM | MEF_FPKM |
|---|
0016513
(v1.0) | Pnkd | NM_001039509,NM_019999,NM_025580 | 56695
| 25.4141 | 22.9502 | 6.70825 | 8.75532 | 7.24472 | |
|
| SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided |
| DBTMEE | Gene | RefSeq | Entrez | Oo_FPKM | SPR_FPKM | 1C_FPKM |
|---|
0016513
(v1.0) | Pnkd | NM_001039509,NM_019999,NM_025580 | 56695
| 26.5728 | 24.9885 | 25.0392 |
|
| SOLiD_Partheno1C_FPKM_gene_guided |
| DBTMEE | Gene | RefSeq | Entrez | Oo_FPKM | 1C_FPKM | p1C_FPKM |
|---|
0016513
(v1.0) | Pnkd | NM_001039509,NM_019999,NM_025580 | 56695
| 25.9377 | 22.7198 | 31.4626 |
|
| SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided |
| DBTMEE | Gene | RefSeq | Entrez | Oo_FPKM | SPR_FPKM | p1C_FPKM |
|---|
0016513
(v1.0) | Pnkd | NM_001039509,NM_019999,NM_025580 | 56695
| 26.5883 | 24.6462 | 34.5071 |
|
| SOLiD_Partheno4C_FPKM_gene_guided |
| DBTMEE | Gene | RefSeq | Entrez | 2C_FPKM | 4C_FPKM | p4C_FPKM |
|---|
0016513
(v1.0) | Pnkd | NM_001039509,NM_019999,NM_025580 | 56695
| 6.21079 | 8.45361 | 6.52302 |
|
| Illumina_Oo_2C_FPKM_gene_guided |
| DBTMEE | Gene | RefSeq | Entrez | Oo_FPKM | 2C_FPKM |
|---|
0016513
(v1.0) | Pnkd | NM_001039509,NM_019999,NM_025580 | 56695
| 7.06291 | 1.87612 |
|
| SOLiD_SC_Oo_REPLICA_FPKM_gene_guided |
| DBTMEE | Gene | RefSeq | Entrez | Oo_1_1 | Oo_2_1 |
|---|
0016513
(v1.0) | Pnkd | NM_001039509,NM_019999,NM_025580 | 56695
| 103.099 | 62.9017 |
|
| NIA60mer |
| DBTMEE | Array_Feature_Number | Oligo_Parent_Clone | Unigene | Gene | Entrez | U_Cluster | NAP_Cluster | Gene_U/NAP | TIGR | SwissProt | EST | Oo | 1C | 2C | 4C | 8C | Morula | Blastocyst |
|---|
0016513
(v1.0) | 12771 | H3152B02-3 | Mm.177272 | Brp17 | 56695
| U000447 | NAP006071-001 | Brp17; | TC837856,TC837851 | Q9JJA3 | | 4.2313 | 4.5221 | 4.9773 | 4.8 | 4.3711 | 4.712 | 4.4909 |
|
| MOE430 |
| DBTMEE | Probe_ID | Unigene | Gene | RefSeq | Entrez | Oo | 1C | 2C | 8C | Blastocyst |
|---|
0016513
(v1.0) | 1451399_at | Mm.384726 | Pnkd | NM_001039509.1,NM_019999.2,NM_025580.2 | 56695
| 188.075 | 293.125 | 145.3 | 0 | 246.75 |
|
| Agilent44K |
| DBTMEE | Probe_ID | Gene | Acc | Entrez | Oo1_xFold | Oo1_pVal | Oo1_Flag | Oo2_xFold | Oo2_pVal | Oo2_Flag |
|---|
0016513
(v1.0) | A_51_P177622 | MGI:1930773 | NM_025580 | 56695
| 1 | 1 | P | 1.31 | 0.225 | P |
0016513
(v1.0) | A_51_P372141 | MGI:1930773 | NM_019999 | 56695
| 1 | 1 | P | 1.184 | 0.391 | P |
0016513
(v1.0) | A_52_P482830 | MGI:1930773 | NM_025580 | 56695
| 1 | 1 | P | 1.241 | 0.276 | P |
|
| Proteome |
N/A |
