DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0016522
GenePnma5
Synonyms
Desc.paraneoplastic antigen family 5
LocusNM_001100461 chrX:70279320-70282442(-)
DB links


Entrez 385377
MGI 2180566
Ensembl ENSMUSG00000050424
Vega OTTMUSG00000017701
Featureprotein-coding
GO(BP)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2017008
(v2.0)
Pnma5NM_001100461385377
014.417927.265618.13797.321214.24710.058675121.770111.106515.5201
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0016522
(v1.0)
Pnma5385377
Minor ZGA0.91876
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2017008
(v2.0)
Pnma5385377
284/203-0.0283167/203-0.395613/203-0.340771/203-0.181999/2031.007621/2031.0102
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2017008
(v2.0)
Pnma5385377
117/88-0.100785/88-0.16437/88-0.044742/880.257447/881.1166327/881.2847
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2017008
(v2.0)
Pnma5385377
54.40198961.13
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2017008
(v2.0)
Pnma5385377
30.3264468.92
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0016522
(v1.0)
Pnma5NM_001100461385377
14.986918.921213.48955.047080.0420405
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0016522
(v1.0)
Pnma5FR135165,NM_001100461385377
120.024121.35599.651238.74440.0484236
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0016522
(v1.0)
Pnma5NM_001100461385377
15.6701020.6434
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0016522
(v1.0)
Pnma5NM_001100461385377
15.295618.731216.14
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0016522
(v1.0)
Pnma5FR135165,NM_001100461385377
199.67134.009
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0016522
(v1.0)
Pnma5NM_001100461385377
15.6793017.7018
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0016522
(v1.0)
Pnma5NM_001100461385377
12.48924.873167.67423
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0016522
(v1.0)
Pnma5NM_001100461385377
5.7139.00054
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0016522
(v1.0)
Pnma5NM_001100461385377
7.695794.97874
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0016522
(v1.0)
Pnma5NM_001100461385377
22.802523.9715
NIA60mer N/A
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0016522
(v1.0)
1439207_atMm.327861Pnma5NM_001100461.3385377
2382.0253354.652038.775390.851746.6
Agilent44K N/A
Proteome N/A