DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0016554
GenePogz
Synonyms
Desc.pogo transposable element with ZNF domain
LocusNM_001165948 chr3:94641489-94687489(+)
NM_172683 chr3:94641489-94687489(+)
DB links


Entrez 229584
MGI 2442117
Ensembl ENSMUSG00000038902
Vega OTTMUSG00000019666
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2017040
(v2.0)
PogzNM_001165948,NM_172683229584
2.947555.954049.484248.759857.163218.225255.655389.66187.205938.86068
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0016554
(v1.0)
Pogz229584
Minor ZGA0.89613
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2017040
(v2.0)
Pogz229584
559/436-0.1539424/436-0.156196/4361.3932328/4360.9167142/4360.4358985/4360.5754
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2017040
(v2.0)
Pogz229584
237/1450.1948191/1450.279687/1452.7646244/1452.063230/145-0.2088191/145-0.2003
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2017040
(v2.0)
Pogz229584
48.01259650.01
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2017040
(v2.0)
Pogz229584
12.48295721.9
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0016554
(v1.0)
PogzNM_001165948,NM_172683229584
6.191666.540736.520584.969293.94293
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0016554
(v1.0)
PogzFR314123,FR336670,FR356671,NM_001165948,NM_172683229584
50.938344.617949.220961.043436.5576
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0016554
(v1.0)
PogzNM_001165948,NM_172683229584
6.473941.077967.13608
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0016554
(v1.0)
PogzNM_001165948,NM_172683229584
6.319216.475067.15836
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0016554
(v1.0)
PogzFR314123,FR336670,FR356671,NM_001165948,NM_172683229584
16.29985.1935
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0016554
(v1.0)
PogzNM_001165948,NM_172683229584
6.477711.063197.85105
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0016554
(v1.0)
PogzNM_001165948,NM_172683229584
6.037044.798044.97218
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0016554
(v1.0)
PogzFR314123,FR336670,FR356671,NM_001165948,NM_172683229584
41.851566.0663
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0016554
(v1.0)
PogzNM_001165948,NM_172683229584
28.899216.2908
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0016554
(v1.0)
PogzNM_001165948,NM_172683229584
0.6640410.896663
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0016554
(v1.0)
11567H3119A02-5LOC229584229584
U042458NAP001487-001TC898680,TC849164U,F,22.8182.82042.89962.83412.92172.7942.8376
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0016554
(v1.0)
1455046_a_atMm.274787PogzNM_172683.3,NM_001165948.1229584
464.325193.525560.9251144.475905.675
Agilent44K N/A
Proteome N/A