DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0016560
GenePold3
SynonymsC85233
GC12
P66
P68
Desc.polymerase (DNA-directed), delta 3, accessory subunit
LocusNM_133692 chr7:107230623-107270010(-)
DB links


Entrez 67967
MGI 1915217
Ensembl ENSMUSG00000030726
Vega OTTMUSG00000025292
Featureprotein-coding
GO(BP)
  •   2 Terms
      DNA-dependent DNA replication (GO:0006261)
      nucleotide-excision repair, DNA gap filling (GO:0006297)
GO(MF)
GO(CC)
KEGG
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2017046
(v2.0)
Pold3NM_13369267967
12.1493134.746279.36461.5742140.38328.58039.17794274.51121.0632.4601
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0016560
(v1.0)
Pold367967
1-Cell Transient0.91353
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2017046
(v2.0)
Pold367967
751/4590.1971491/459-0.0189620/4593.99951842/4593.328944/459-1.3057327/459-1.085
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2017046
(v2.0)
Pold367967
332/1650.4934233/1650.3796529/1655.18221497/1654.491912/165-1.64478/165-1.6612
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2017046
(v2.0)
Pold367967
73.040914052.17
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2017046
(v2.0)
Pold367967
21.46558525.25
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0016560
(v1.0)
Pold3NM_13369267967
140.039193.60345.828697.34226.51513
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0016560
(v1.0)
Pold3NM_13369267967
159.212198.98964.561253.23823.9029
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0016560
(v1.0)
Pold3NM_13369267967
146.4244.44312211.225
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0016560
(v1.0)
Pold3NM_13369267967
142.924191.659203.142
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0016560
(v1.0)
Pold3NM_13369267967
201.511225.673
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0016560
(v1.0)
Pold3NM_13369267967
146.5094.38226222.799
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0016560
(v1.0)
Pold3NM_13369267967
42.430193.987883.589
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0016560
(v1.0)
Pold3NM_13369267967
169.256265.445
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0016560
(v1.0)
Pold3NM_13369267967
73.539325.4906
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0016560
(v1.0)
Pold3NM_13369267967
35.678212.7551
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0016560
(v1.0)
1035C0174C02-3Mm.375622410142G14Rik67967
U028908NAP093978-001Pold3-pendingTC858823Q9EQ28U,F,23.60113.79433.44693.86463.6743.83413.7418
0016560
(v1.0)
9101H3076E01-3Mm.375622410142G14Rik67967
U028908NAP093978-001TC858824,TC858823Q9EQ28U,F,22.68592.8532.99493.09512.78482.97742.7392
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0016560
(v1.0)
1426838_atMm.37562Pold3NM_133692.267967
656.3632.225661.7546.7315.525
0016560
(v1.0)
1443733_x_atMm.37562Pold3NM_133692.267967
763.75765.35837.15700.65370.875
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0016560
(v1.0)
A_52_P271244Pold3NM_13369267967
11P1.2920.24P
0016560
(v1.0)
A_52_P78383Pold3NM_13369267967
11P0.5520.106P
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0016560
(v1.0)
Pold367967
001001